hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mph/mph02290/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4068  ( 129 res)   mph02290

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PX       PX domain                                       42.1    1.2e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PX         1/1      29   129 .]     1   133 []    42.1  1.2e-08

Alignments of top-scoring domains:
PX: domain 1 of 1, from 29 to 129: score 42.1, E = 1.2e-08
                   *->dsilivvvvdpetsrkkegskkhtyyvyeittktnkewsVkRRYsdF
                      +si +v+v+d +   k++ + kh++y++++t++ + +  ++RRYs F
   mKIAA4068    29    RSIVEVKVLDVQ---KRRVPNKHYVYIIRVTWSSGATEAIYRRYSKF 72   

                   eeLhekLlrkfpa.......lgrilPplPpKklfgryrkeslemtsvkhs
                   ++L++++l kfp++++++++  ri+P lP+K lf+r+             
   mKIAA4068    73 FDLQMQMLDKFPMeggqkdpKQRIIPFLPGKILFRRS------------- 109  

                   snnfdeefiekRrkgLeeyLqrllqhPelsnesevvleFLesd<-*
                      ++++++ kR + ++ey +        ++               
   mKIAA4068   110 ---HIRDVAVKRLIPIDEYCK--------VS------------    129  

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