hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh02927/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4064  ( 994 res)   mbh02927

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PTPc       Protein tyrosine phosphatase, catalytic do   381.9   3.7e-110   1
PTPc_motif Protein tyrosine phosphatase, catalytic do   132.3    5.3e-35   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PTPc_motif   1/1     881   983 ..     1    92 []   132.3  5.3e-35
PTPc         1/1     723   986 ..     1   308 []   381.9 3.7e-110

Alignments of top-scoring domains:
PTPc_motif: domain 1 of 1, from 881 to 983: score 132.3, E = 5.3e-35
                   *->tvkhyhytgWpDhvekdsgvPe..dsileflravrk.......PivV
                      t++++h+++Wp       g+P ++ ++l+f+r+v+k  ++++ Pi+V
   mKIAA4064   881    TLTQFHFLSWPAE-----GTPAstRPLLDFRRKVNKcyrgrscPIIV 922  

                   HCSAGvGRTGtfvaidillqq.......vdifdtvkelRsqRpgmvqtee
                   HCS+G+GRTGt+++id++l++  ++ +++di  t++++R+qRpg+v +++
   mKIAA4064   923 HCSDGAGRTGTYILIDMVLNRmakgvkeIDIAATLEHVRDQRPGLVRSKD 972  

                   QYlFlyralle<-*
                   Q+ F   a++e   
   mKIAA4064   973 QFEFALTAVAE    983  

PTPc: domain 1 of 1, from 723 to 986: score 381.9, E = 3.7e-110
                   *->gleeEferlqrltpddllsnfltdesctvanlpeNreseKNRYkcdi
                       l++E++ l++++ +++        +c  a+ + N+  +KNR++ d 
   mKIAA4064   723    RLAKEWQALCAYQAEPN--------TCAAAQDESNI--KKNRHP-DF 758  

                   lpyDhtRVkLkppdgesdseegsDYINAnyidgy.kepkayIaTQGPLps
                   lpyDh R+kLk + +     + sDYINA+ i  ++++  ayIaTQGPL +
   mKIAA4064   759 LPYDHARIKLKVESSP----SRSDYINASPIIEHdPRMPAYIATQGPLSH 804  

                   TveDFWrMVweqkvpvIVMLtnlvEkkterrkeggreKCaqYWPee.slt
                   T++DFW+MVwe +++vIVMLt lvE         g++ C++YWP+e+s  
   mKIAA4064   805 TIADFWQMVWESGCTVIVMLTPLVED--------GVKQCDRYWPDEgSSL 846  

                   yGditVtlvseeklpddytiRtlevtntgtekkdlkaksetrtVthyhyt
                   y+ ++V+lvse+++++d+ +R ++++n +t        +etrt+t++h+ 
   mKIAA4064   847 YHVYEVNLVSEHIWCEDFLVRSFYLKNLQT--------QETRTLTQFHFL 888  

                   nWPDhgvPespkslldfvrlvrksqssspnssenivssnskyagtspsgP
                   +WP  g+P s+++lldf+r+v+k+++ +                   s P
   mKIAA4064   889 SWPAEGTPASTRPLLDFRRKVNKCYRGR-------------------SCP 919  

                   ivVHCSAGvGRTGTFiaidillqqlea....vdifdiVkelRsqRpgmVQ
                   i+VHCS+G+GRTGT+i+id++l+++ ++ +++di  ++ ++R+qRpg+V 
   mKIAA4064   920 IIVHCSDGAGRTGTYILIDMVLNRMAKgvkeIDIAATLEHVRDQRPGLVR 969  

                   TeeQYiFlyraileylk<-*
                   +++Q+ F   a++e +    
   mKIAA4064   970 SKDQFEFALTAVAEEVN    986  

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