hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh02927/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4064  ( 994 res)   mbh02927

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Y_phosphatase Protein-tyrosine phosphatase              387.3   1.6e-112   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Y_phosphatase   1/1     749   983 ..     1   275 []   387.3 1.6e-112

Alignments of top-scoring domains:
Y_phosphatase: domain 1 of 1, from 749 to 983: score 387.3, E = 1.6e-112
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAnyidgpivrllvv
                      N++KNR++d lpyDh R+kLk + ++  sDYINA+ i  +       
   mKIAA4064   749    NIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIEH------- 788  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   +++ +ayIaTQgPl++Ti+DFW+Mvwe ++tvIVMLt lvE+g   ++ C
   mKIAA4064   789 DPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVEDGV--KQ-C 835  

                   aqYWPeeskeggsltyGditVtlvseek.eadytvRtleltn.gdgskil
                   ++YWP+    +gs  y  ++V+lvse+  ++d+ vR + l+n ++     
   mKIAA4064   836 DRYWPD----EGSSLYHVYEVNLVSEHIwCEDFLVRSFYLKNlQT----- 876  

                   akqekkgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnvel
                         +etrt+t+fh+++WP  g+P s +++lld++rkv+k+++     
   mKIAA4064   877 ------QETRTLTQFHFLSWPAEGTPAS-TRPLLDFRRKVNKCYR----- 914  

                   gerspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevidv
                       ++s+       Pi+VHCS+G+GRTGt+i+id++l+++ ++ + id+
   mKIAA4064   915 ----GRSC-------PIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDI 953  

                   fdiVkelRsqRpgmVQteeQYiFlydaile<-*
                     +++++R qRpg+V + +Q++F   a++e   
   mKIAA4064   954 AATLEHVRDQRPGLVRSKDQFEFALTAVAE    983  

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