hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mic/mic12051/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4058  ( 832 res)   mic12051

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
KISc     Kinesin motor, catalytic domain. ATPase.       582.8   1.3e-170   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
KISc       1/1      44   411 ..     1   404 []   582.8 1.3e-170

Alignments of top-scoring domains:
KISc: domain 1 of 1, from 44 to 411: score 582.8, E = 1.3e-170
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv.....tvtvn..
                       ++ +V+ R+   RPl+++E++ +    +  ++t++ + ++vt++++
   mKIAA4058    44    SEALKVVARC---RPLSRKEEAAG----HEQILTMdvklgQVTLRnp 83   

                   ..........FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNv
                   +  +++ +++FtFD V+      d+s+ Q d ++e+++PL+ds+l+G+N+
   mKIAA4058    84 raapgelpktFTFDAVY------DASSKQADLYDETVRPLIDSVLQGFNG 127  

                   aTIFAYGQTGSGKTyTMsGtptdpgilsndladitpdepGiIPRaledlF
                    T+FAYGQTG+GKTyTM Gt            ++ p+ +G+IP a+e++F
   mKIAA4058   128 -TVFAYGQTGTGKTYTMQGT------------WVEPELRGVIPNAFEHIF 164  

                   ekide.....fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkk
                   ++i ++++++++V++SylEIY+E+irDLLs++p               k+
   mKIAA4058   165 THISRsqnqqYLVRASYLEIYQEEIRDLLSKEPG--------------KR 200  

                   LrirEdkngnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGn
                   L+++E++                 gvy+++L+ ++ +++ e+++++++Gn
   mKIAA4058   201 LELKENPE---------------TGVYIKDLSSFVTKNVKEIEHVMNLGN 235  

                   knRtvaaTkmNeeSSRSHaiFtitleqkeklepiadektesstnegteqi
                   + R+v++T+mNe SSRSHaiF it+e               +  +g + i
   mKIAA4058   236 QARAVGSTHMNEVSSRSHAIFVITVECS------------ERGSDGQDHI 273  

                   ksskLnLVDLAGSERaskTg......................s..eaeGd
                   +++kLnLVDLAGSER++k+g++  +++ ++++ ++++++++ s++ ++G+
   mKIAA4058   274 RVGKLNLVDLAGSERQNKAGpnaaggpatqptagggsgsgsaSgsASSGE 323  

                   RLkEaqnINkSLlaLGnVInALaddshdsaeseatkqaggkssHIPYRDS
                   R kEa +IN+SL+aLGnVI+ALa                 +s+HIPYRDS
   mKIAA4058   324 RPKEASKINLSLSALGNVIAALAG---------------NRSTHIPYRDS 358  

                   KLTrLLQdSLGGNsKTlMIanvSPsssnyeETlsTLrFAsRaksIknkpa
                   KLTrLLQdSLGGN+KT+M+a++ P+s +y+E+lsTLrFA+Rak+Iknkp 
   mKIAA4058   359 KLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPR 408  

                   vne<-*
                   vne   
   mKIAA4058   409 VNE    411  

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