hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/msj/msj07024/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA4033  ( 718 res)   msj07024

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
An_peroxidase Animal haem peroxidase                    530.9   9.2e-156   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
An_peroxidase   1/1     145   695 ..     1   619 []   530.9 9.2e-156

Alignments of top-scoring domains:
An_peroxidase: domain 1 of 1, from 145 to 695: score 530.9, E = 9.2e-156
                   *->spYRtlDGtCNNLqnPRtwGaantpfrRllgPPsYdDGidaPRsrSa
                      ++YRt++G CNN++ P t+Ga+n++f R l P++Y+DG+      S+
   mKIAA4033   145    DKYRTITGHCNNRRSP-TLGASNRAFVRWL-PAEYEDGV------SM 183  

                   ..........dGspLPsaRviSrklhg...dstfldpkpsfthllmqwGQ
                   +   +++ +++G + P aR++S+ + + ++d+  +d    + ++ mqwGQ
   mKIAA4033   184 pfvwtpgvnrNGFKVPLARQVSNAIVRfpnDQLTKDQE--RALMFMQWGQ 231  

                   FmaHDitfttmpsstsedGdaldCCscgkkvsgsnvhprFCfPIpipadD
                   F++HDit t  p ++ ++ + l+C       +  +++p  CfP +ip++D
   mKIAA4033   232 FLDHDITLTPEPATRFSFFTGLNCE------TSCLQQPP-CFPLKIPPND 274  

                   pyfgpfgRgvrClrFvRsapapttigsdcelgpRAeQlNqnTayiDaSvv
                   p  +  +    C++F+Rs pa+t+        +R +Q+N +T+++DaS v
   mKIAA4033   275 PRIKNQK---DCIPFFRSCPACTR----NNITIR-NQINALTSFVDASGV 316  

                   YGSsaeearklRaFqg..GlLktsptdglPvrrdllPidnnesaecsers
                   YGS++  arklR  +++ GlL ++++++   +r l+P+d+   ++c    
   mKIAA4033   317 YGSEDPLARKLRNLTNqlGLLAVNTRFQ-DNGRALMPFDSLHDDPCLLTN 365  

                   asrlgkyCFiaGDdRaNlqpgLaaLHiLFvREHNrlAaaLkelNPhWsDE
                   +s    +CF+aGD R ++ p L+++H+LFvREHNrlA++Lk+lNP+W+ E
   mKIAA4033   366 RS-ARIPCFLAGDMRSSEMPELTSMHTLFVREHNRLATQLKRLNPRWNGE 414  

                   rlFQEARkIviAqmQhItynEyLPilLGksltlmkmfglrplksGygpyd
                   +l+QEARkIv+A++Q Ity++yLP +LG+  + mk++           y+
   mKIAA4033   415 KLYQEARKIVGAMVQIITYRDYLPLVLGP--AAMKKYLP------Q--YR 454  

                   gYdpnVnPsilneFAaAAFRFGHSlipgafprvdengnpintgVpYsltr
                    Y+++V+P i+n F + AFR+GH+li+++  r++ + +p + +   + ++
   mKIAA4033   455 SYNDSVDPRIANVF-TNAFRYGHTLIQPFMFRLNNQYRPTGPN---PRVP 500  

                   LsdgvfnpdqlyadglgvrdIdatilarevPLedlidadaEklLadigvd
                   Ls+ +f + ++  +g                                g+d
   mKIAA4033   501 LSKVFFASWRVVLEG--------------------------------GID 518  

                   ellrGLatqpaq..rvDrfitpeltnkLFetrgfngdrlfGlDLasiNIQ
                   ++lrGL+ +pa+ +r    + +e++++LFe+  +      GlDL ++N+Q
   mKIAA4033   519 PILRGLMATPAKlnRQNQIVVDEIRERLFEQVMR-----IGLDLPALNMQ 563  

                   RGRDhGlpsYNefRefCGLppitsFeDltdviFtdpetlarLgrvYasdp
                   R RDhGlp YN +R+fCGLp   +  +l +v+  + e++ +L   Y++ p
   mKIAA4033   564 RSRDHGLPGYNAWRRFCGLPQPSTVGELGTVL-KNLELARKLMAQYGT-P 611  

                   dDIDLyVGgllEkpvpGglvGpTfaCIIgeQFsRlrrGDRFyYEngnnpg
                   + ID + Gg++E+  p g vG ++aC Ig+QF+ lr+GDRF+ E   npg
   mKIAA4033   612 NNIDIWMGGVSEPLEPNGRVGQLLACLIGTQFRKLRDGDRFWWE---NPG 658  

                   sFTpeQLaeiRKvsLsrliCdNtdevniervqp.daFsvp<-*
                   +F++ Q +++  +sL r+iCdNt    i++v+++++F+ +   
   mKIAA4033   659 VFSKQQRQALASISLPRIICDNTG---ITTVSKnNIFMSN    695  

//