hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpg/mpg01178/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4025  ( 930 res)   mpg01178

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HSP70    Hsp70 protein                                  910.2     6e-270   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HSP70      1/1      91   781 ..     1   620 []   910.2   6e-270

Alignments of top-scoring domains:
HSP70: domain 1 of 1, from 91 to 781: score 910.2, E = 6e-270
                   *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGERLV
                      v+GIDLG++ ++VAV++ g++e+IaN++++R+TP++V+F++k +R++
   mKIAA4025    91    VVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACVSFGPK-NRSI 136  

                   GqaAKrQavtNpeNTvfsvKRlIGRrFddpeVqkdikhvPykvvkdsngd
                   G aAK+Q+++N++NTv+++KR++GR+F+dp+V++++++++y++v++++g 
   mKIAA4025   137 GAAAKSQVISNAKNTVQGFKRFHGRAFSDPFVEAEKSNLAYDIVQLPTGL 186  

                   awveveylGkkktftPeeISAmvLqKmKetAEayLGekVtkAVITVPAYF
                   ++++v+y++++++ft e++ Am+L+K+KetAE+ L+++V ++V+ VP ++
   mKIAA4025   187 TGIKVTYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSVPSFY 236  

                   NDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpe.eekerni
                   +Da+R++++DA +IAGLn+lR++NE+TA+ALAYG++K+dlp+ eek+rn+
   mKIAA4025   237 TDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPAlEEKPRNV 286  

                   lVfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeF
                   +++D+G++ ++VS++++++G+++V+aT++DT LGG+ FD++lv+h++eeF
   mKIAA4025   287 VFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEVLVNHFCEEF 336  

                   kkkegiDlskDkrAlqRLreAAEKAKieLSsssqTeinLpfitadadGPk
                   +kk+++D+++  rAl RL +++EK+K+ +S++  ++ +L+++++++ + +
   mKIAA4025   337 GKKYKLDIKSKIRALLRLSQECEKLKKLMSAN-ASDLPLSIECFMN-D-I 383  

                   hlsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGST
                   ++s+t++R kF e+++dL++R+  P++++L+++kl+k+dI+ V++VGG+T
   mKIAA4025   384 DVSGTMNRGKFLEMCDDLLARVEPPLRSVLEQSKLKKEDIYAVEIVGGAT 433  

                   RIPkVqelVkefFGdGKePskgvNPDEAVAiGAAvQaGVLsGseeVkDvl
                   RIP+V+e++++fFG  Ke+s+++N DEAV +G+A+Q+++Ls++++V+++ 
   mKIAA4025   434 RIPAVKEKISKFFG--KELSTTLNADEAVTRGCALQCAILSPAFKVREFS 481  

                   LLDVtPLSLGIETlGGv.mtklIeRNTTIPTkks.qiFSTaaDNQt.aVe
                   + DV+P  + I++++++++++  + ++++P +++ +++++ +++++++++
   mKIAA4025   482 ITDVVP--YPISLRWNSpAEEGLSDCEVFPKNHAaPFSKVLTFYRKePFT 529  

                   IqVlQGERelakDN.klLGqFeLdGIpPAPrG.vPqIEVtFdIDANGIln
                   +++++ +++  ++ +  ++qF ++ ++P+ +G++ +++V+++++++GI++
   mKIAA4025   530 LEAYYSSPQDLPYPdPAIAQFSVQKVTPQSDGsSSKVKVKVRVNVHGIFS 579  

                   VsAkDkgtgkeqkItItnssgrLsddEIer....................
                   Vs++ + + ++++   ++++++++++E+e+ + +++++++++++++++++
   mKIAA4025   580 VSSAALVEVHKSEESEEPMETDQNAKEEEKmqvdqeephteeqqqqpqtp 629  

                   ..................................................
                    +++ ++++ ++++ ++++++++++++ ++ + ++++ + + +++   + 
   mKIAA4025   630 aenkaeseemetsqagskdkktdqppqakkakvktstvdlpiesqllwql 679  

                   ......MvkdAE.kyaeeDkkrkeriEakNeaEsyvystekslkeeklgd
                   +++  ++  + E+k+  +Dk  ker +akN  E+yvy+++++l+ e +++
   mKIAA4025   680 dremlgLYTENEgKMIMQDKLEKERNDAKNAVEEYVYEMRDKLSGE-YEK 728  

                   klseadkekiekkvedaiewLkealegeddaekeeikakteeLqkvvqki
                   ++se+d  +++ k+ed+++wL+e +   +d  k+ + +k+ eL++ +q+i
   mKIAA4025   729 FVSEDDRNTFTLKLEDTENWLYEDG---EDQPKQVYVDKLAELKSLGQPI 775  

                   gekmyq<-*
                    ++ ++   
   mKIAA4025   776 KTRFQE    781  

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