hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpj/mpj00521/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4024  ( 188 res)   mpj00521

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Peptidase_C69 Peptidase family C69                       12.2    2.4e-13   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Peptidase_C69   1/1       4   188 .]     1   449 []    12.2  2.4e-13

Alignments of top-scoring domains:
Peptidase_C69: domain 1 of 1, from 4 to 188: score 12.2, E = 2.4e-13
                   *->aCTtiLVGKkASaDGSTiiARNEDSyglgggainpkkfivvpakdhe
                      +C+t++++++A++ +++i+++N+D     + +++++++i++pa++h+
   mKIAA4024     4    SCDTFVALPPATVGNRVIFGKNSD-----RLFDEVQEVIYCPAAVHN 45   

                   dqprhYkSvtngftipLPenplrYTsvpnvpetddgkdGiweeAGiNean
                   d               + + +++Y++v++vpet+++  +++++A++++a+
   mKIAA4024    46 D--------------LEKRLKCTYIEVDQVPETYAV--VLSRPAWLWGAE 79   

                   VgMSATETittNervLgaDPyvvadeegGlgEedlvtlvLPyikSAREGV
                   +g+++++++++Ne+v+g++++    +e++l+++dlv+l+L+++++A  ++
   mKIAA4024    80 MGANEHGVCIGNEAVWGREDIS---KEEALLGMDLVRLGLERADTAEKAL 126  

                   erLGdLlEeYGtyGNclEdaesSEgNGvafsDkdEIWyLETiGGHhWvAv
                   ++++dLlE+YG++GNc+E++e+S++N+++++D++E+W+LET  G++W+A+
   mKIAA4024   127 DVIVDLLEKYGQGGNCAEGKEFSYYNSFLIADRNEAWILETS-GKYWAAE 175  

                   RiPDDaYavapNQlrIdtfDfNDkGQdnymaSpDLrefaeknhLnptked
                   R++     v                                         
   mKIAA4024   176 RVQG----V----------------------------------------- 180  

                   geFNfrkaFGLtqdekDrhYNtPRvWygQrlLndhedydPeiktqtPesq
                                                   n                 
   mKIAA4024   181 --------------------------------N---------S------- 182  

                   dlPfirkpnrKIsvEDVkfvLrsHYegTnlpyDPyGsfgqGtaeekkrfR
                                                                     
   mKIAA4024     - -------------------------------------------------- -    

                   kfyeypIginRtqeshvlQiRpnvPaeiagvqWlAfGspsfsvyvPFyan
                                                                     
   mKIAA4024     - -------------------------------------------------- -    

                   vndtpaayrRVdtttkvdtdwnsaYWlfrtiavLvdshydefahdvqdyq
                         + +         +                               
   mKIAA4024   183 ------YLQ---------FG------------------------------ 187  

                   ke<-*
                        
   mKIAA4024   188 -S    188  

//