hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mbg/mbg09509/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA4016 ( 465 res) mbg09509 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Peptidase_M16 Insulinase (Peptidase family M16) 248.6 8.6e-71 1 Peptidase_M16_C Peptidase M16 inactive domain 154.6 1.7e-42 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Peptidase_M16 1/1 43 190 .. 1 160 [] 248.6 8.6e-71 Peptidase_M16_C 1/1 195 380 .. 1 198 [] 154.6 1.7e-42 Alignments of top-scoring domains: Peptidase_M16: domain 1 of 1, from 43 to 190: score 248.6, E = 8.6e-71 *->rVasesdppadtsavglwidaGSryEpddnnGlAHFLEHmaFkGTkk rVase + + +t++vg+widaGSryE+++nnG+ +FLEH+aFkGTk+ mKIAA4016 43 RVASEQS-SHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKN 88 ypseneleeeleklGGslaRDvNAyTsrEhTvYyvevlnddkqkllpkav +p+ n+le+e+e++G++l NAy++rEhT+Y ++l++d lpk+v mKIAA4016 89 RPG-NALEKEVESIGAHL----NAYSTREHTAYLIKALSKD----LPKVV 129 DrLadvllnPlftesevererlvvlyEveavdaeprpqevlldnlhaaay ++Lad+++n+ +++s +e+er+v+l+E+++ da + q+v++d+lha+a+ mKIAA4016 130 ELLADIVQNSSLEDSQIEKERDVILREMQENDASM--QNVVFDYLHATAF 177 rgtpLgrsllgPg<-* +gtpL+ +++gP mKIAA4016 178 QGTPLAQAVEGPS 190 Peptidase_M16_C: domain 1 of 1, from 195 to 380: score 154.6, E = 1.7e-42 *->sltredLkdFykkhYspdnmvlvvvGdvdhdellalaekyfgdlpas +l+r dL d+ ++hY +++mvl+++G v+h++ll+la+k+++++ + mKIAA4016 195 RLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQQLLDLAQKHLSSVSRV 241 kekalvpplneAkgkpr.pprepakl.g.evvvp.kdvpqahlalafpgp + p ++p++++g+e++ +++ +p ah+a+a +gp mKIAA4016 242 ------------YEEDAvPGLTPCRFtGsEIRHRdDALPLAHVAIAVEGP 279 plsddpdsaaldvLnelLggg....g.g.gmsSrLfqelrekegLpaysv ++ pd+ +l+v+n+++g+++ + g+g + sS+L + + L + s+ mKIAA4016 280 GW-ANPDNVTLQVANAIIGHYdctyGgGvHLSSPLASVAV-ANKL-CQSF 326 safndsysyndddtGlfgiya.tdpegenleeRvlelileeleklaeeGi fn sys dtGl+g ++ +d+ +++ ++ +++ ++ +l+ mKIAA4016 327 QTFNISYS----DTGLLGAHFvCDAM--SIDD-MVFFLQGQWMRLCTS-A 368 teeeleraknql<-* te e+ r kn+l mKIAA4016 369 TESEVTRGKNIL 380 //