hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mek/mek02257/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA4014 ( 325 res) mek02257 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Aldo_ket_red Aldo/keto reductase family 481.4 7e-141 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Aldo_ket_red 1/1 12 303 .. 1 361 [] 481.4 7e-141 Alignments of top-scoring domains: Aldo_ket_red: domain 1 of 1, from 12 to 303: score 481.4, E = 7e-141 *->LnnGlklemPllGlGtwqtpgwgrvdkeeakeavkaAldaGYRhiDt Ln+G+ +P+lG+Gt++ p+ +v+k ea Ald+GYRh Dt mKIAA4014 12 LNDGH--LIPALGFGTYK-PK--EVPKSKSLEAACLALDVGYRHVDT 53 AaiYgNGQkPgkSEeevGeaikealeegsvvVitkykRediFitsgKlwn A++Y++ Eee+G+ai++++ +g vv kRed+Fit+ Klw+ mKIAA4014 54 AYAYQV-------EEEIGQAIQSKIKAG-VV-----KREDLFITT-KLWC 89 tfpedlieyghspkhvrealekSLkrLgLdYvDLyLiHwPdpfkpgiedk t ++p++v++alekSLk+L+LdYvDLy +H+P+p+k g d+ mKIAA4014 90 TC--------FRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSG--DN 129 yplgfptdddgkliyedvpieetWkaleklvdeGkvrsIGVSNfsaeqle + fp++++gk + ++v++++tW+ le+++d+G+v+sIGVSNf+++qle mKIAA4014 130 D---FPVNEQGKSLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLE 176 ellsyagklklipPvvnQvElHPylqqdelrkvPLLpfCkshGIavtAyS ++l+++g lk ++Pv+nQvE+H+yl+q +l++ +C+s++I+++Ay mKIAA4014 177 RILNKPG-LK-YKPVCNQVECHLYLNQRKLLD-----YCESKDIVLVAYG 219 PLGsglLtgkyteedlipgdsrrsllgadkgwsdlgspelledpvlkaiA LG ++ k+w+d++sp+ll dpvl+++A mKIAA4014 220 ALGTQR----------------------YKEWVDQNSPVLLNDPVLCDVA 247 ekygykktpAQvaLrWalqrGggpgvvvvIPKSvnpeRikeNlkvfddfe +k + ++pA +aLr+++qrG +v+++ S+++ ++eNl+vf f+ mKIAA4014 248 KKNK--RSPALIALRYLIQRG-----IVPLAQSFKENEMRENLQVF-GFQ 289 Lteedmkkideldr<-* L++edmk++d+l++ mKIAA4014 290 LSPEDMKTLDGLNK 303 //