hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbj/mbj00682/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4010  ( 352 res)   mbj00682

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
NAD_Gly3P_dh_C NAD-dependent glycerol-3-phosphate deh   305.5    6.3e-88   1
NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate deh   298.7      7e-86   1
F420_oxidored  NADP oxidoreductase coenzyme F420-depe   -38.6      0.033   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
NAD_Gly3P_dh_N   1/1       7   178 ..     1   175 []   298.7    7e-86
F420_oxidored    1/1       8   191 ..     1   252 []   -38.6    0.033
NAD_Gly3P_dh_C   1/1     195   345 ..     1   160 []   305.5  6.3e-88

Alignments of top-scoring domains:
NAD_Gly3P_dh_N: domain 1 of 1, from 7 to 178: score 298.7, E = 7e-86
                   *->kkiaVlGaGsWGTALAkvLadngk.lpdeFeheVrlWgreeki.Gee
                      kk++++G+G+WG+A+Ak+++ n+ +l+ +F+++V++W++ee+i+G++
   mKIAA4010     7    KKVCIVGSGNWGSAIAKIVGSNAGrLA-HFDPRVTMWVFEEDIgGRK 52   

                   lieeINttreNvrYLPGikLPdnlvAttDLeeAlkdAdiivlaVPsqalr
                   l+e+INt++eNv+YLPG+kLP+n+vA +D+++A+ +Adi+v++VP+q+++
   mKIAA4010    53 LTEIINTQHENVKYLPGHKLPPNVVAIPDVVQAATGADILVFVVPHQFIG 102  

                   evlkqlkgllkkdaiivsltKGii.gEpgtlkllSevieEeLpiqprqia
                    +++qlkg+lk+++i +sl+KG+++g  ++lkl+Sevi+E L+i+   ++
   mKIAA4010   103 KICDQLKGHLKANTIGISLIKGVDeGP-NGLKLISEVIGERLGIP---MS 148  

                   VLSGPslAeEVAkglptavvvAsekdqqaae<-*
                   VL+G+++A+EVA+++++++++++ kd++  +   
   mKIAA4010   149 VLMGANIASEVAEEKFCETTIGC-KDPAQGQ    178  

F420_oxidored: domain 1 of 1, from 8 to 191: score -38.6, E = 0.033
                   *->kIGiIGGaGnmGeaLArglaaaGvlppheviiansRdpekaaalaee
                      k+ i+ G+Gn G+a+A+              i+  +++ ++a++ ++
   mKIAA4010     8    KVCIV-GSGNWGSAIAK--------------IV-GSNAGRLAHFDPR 38   

                   lg...................................vildagatavsne
                   +     +++ ++++ ++  ++++++ +  ++++ +++v     a++ ++ 
   mKIAA4010    39 VTmwvfeediggrklteiintqhenvkylpghklppnV----VAIP-DVV 83   

                   eAaeeaDvviLAVppeaapevlaelaadllkgklVIsitngitieqleqy
                   +Aa +aD+ ++ Vp + + + +++l+ +l ++ + Is   g+        
   mKIAA4010    84 QAATGADILVFVVPHQFIGKICDQLKGHLKANTIGISLIKGV-------- 125  

                   llrVvRVMPNTpslvgrgasglaagdpvegsaselvaellpgvGkvveVp
                                               ++ +  l+ e++ g        
   mKIAA4010   126 --------------------------DEGPNGLKLISEVI-G-------- 140  

                   ervvkAfnaisasglaylalpvealadaavlvggddaeAkklvaqladGA
                   er+  + +++ + ++a  ++++e+                k +  ++   
   mKIAA4010   141 ERLGIPMSVLMGANIA--SEVAEE----------------KFCETTIG-- 170  

                   AkMllesgehPaqLkddvtGfggvdiGgLrvlerleprtp<-*
                                      ++++  +  L++l +    ++   
   mKIAA4010   171 -------------------CKDPAQGQLLKDLMQTPNFRI    191  

NAD_Gly3P_dh_C: domain 1 of 1, from 195 to 345: score 305.5, E = 6.3e-88
                   *->eDvvGvEigGALKNViAIAaGivDGkeylgfGdNaKAalitrGLaEm
                      + v++vEi+GALKN++A++aG++DG   lgfGdN+KAa+i++GL+Em
   mKIAA4010   195    QEVDTVEICGALKNIVAVGAGFCDG---LGFGDNTKAAVIRLGLMEM 238  

                   iklgaalGggpeeta.TffgLaGlGDLitTCtselsRNrrvGeaLgkgGI
                   i++++++++g  +++ Tf++++G++DLitTC++  +RNr+v+ea++++G 
   mKIAA4010   239 IAFAKLFCSG-IVSSaTFLESCGVADLITTCYG--GRNRKVAEAFARTG- 284  

                   lksleeiekelselnGqvaEGvkTakevyelakrkglvedmPlteaVYri
                    ks+e++eke+  lnGq+++G+ Ta+e++ ++++kglv+++Pl++aVY++
   mKIAA4010   285 -KSIEQLEKEM--LNGQKLQGPQTARELHSILQHKGLVDKFPLFTAVYKV 331  

                   lyeglkpeeaieeL<-*
                   +yeg+++ e+i++L   
   mKIAA4010   332 CYEGQPVGEFIRCL    345  

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