hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mib/mib36077/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4008  ( 149 res)   mib36077

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Glucosamine_iso Glucosamine-6-phosphate isomerases/6-   152.4    7.6e-42   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Glucosamine_iso   1/1       1   140 [.     1   238 []   152.4  7.6e-42

Alignments of top-scoring domains:
Glucosamine_iso: domain 1 of 1, from 1 to 140: score 152.4, E = 7.6e-42
                   *->waAkyIinrInsfkPtaerpFvLGLPTGstPlgiYkkLielykaGkv
                       + ky i      kP       L                        
   mKIAA4008     1    NLRKYSIC----LKP------CL------------------------ 13   

                   SFKhVvTFNMDEYvGLpkehpeSYhsFMynnFFnHiDIppENihiLnGnA
                                          +h +M              +hi     
   mKIAA4008    14 -----------------------FHVYM-------------SVHI----- 22   

                   adidaECrnYEeKIksyGkIdLFlGGvGpdGHiAFNEpgSSlaSrTRikt
                         C               Fl G+GpdGHiAFNEpgSSl+SrTR kt
   mKIAA4008    23 ------C---------------FLKGIGPDGHIAFNEPGSSLVSRTRLKT 51   

                   LtedTilANsRFFdndvtkVPkyALtVGvgTlLDnaeEvmIlvlGkqKal
                   L++dTilAN+ +Fd+d++kVP++ALtVGvgT++D a+EvmIl++G++Ka+
   mKIAA4008    52 LAMDTILANAKYFDGDLSKVPTMALTVGVGTVMD-AREVMILITGAHKAF 100  

                   ALqkavegkvNdhmwtvSaLQdHpkvllVCDedAtleLKvK<-*
                   AL+ka e++vN hmwtvSa+Q+Hp++++VCDedAtleL+vK   
   mKIAA4008   101 ALYKAMEEGVN-HMWTVSAFQQHPRTIFVCDEDATLELRVK    140  

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