hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj25198/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4004  ( 422 res)   mfj25198

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
CYCc     Adenylyl- / guanylyl cyclase, catalytic doma    56.5    3.3e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
CYCc       1/1     251   409 ..     1   231 []    56.5  3.3e-12

Alignments of top-scoring domains:
CYCc: domain 1 of 1, from 251 to 409: score 56.5, E = 3.3e-12
                   *->eekkktdrLLyqlLPasvAeslkegr..................epv
                       ekk  ++LL ++LPa+ A+++k++   + + +++++++++++ ++ 
   mKIAA4004   251    TEKKHQEHLLLSILPAYLAREMKAEImarlqagqrsrpentnnfHSL 297  

                   paesydsVTilFsDIvgFTslcsastPeqvvtlLndlysrFDriidrhgg
                   + ++++ V++l++DIvgFT+l+s+++P ++v +Ln+l+ +FD+i ++h  
   mKIAA4004   298 YVKRHQGVSVLYADIVGFTRLASECSPKELVLMLNELFGKFDQIAKEHE- 346  

                   srvvvYKVeTiGDaYMVvsGlPeeaetsaesklkddglteawcfavqhae
                       +  ++ +GD+Y++vsGlP +                      +ha 
   mKIAA4004   347 ----CMRIKILGDCYYCVSGLPLSLP--------------------DHAI 372  

                   liadeaLdmveslktvkvphrkgelpgeglrvRiGiHtGpVvaGVvGlrm
                   +++ ++Ldm+ ++++                           a V ++  
   mKIAA4004   373 NCVRMGLDMCRAIRS---------------------------ALVCEQE- 394  

                   pRYclFGdTVNlASRmEStgdpgqIqvSeetyslLqlgqaerrekggfef
                                                  ++++       +  +g+++
   mKIAA4004   395 -------------------------------KLRA------PGVGEGVRE 407  

                   ee<-*
                    +   
   mKIAA4004   408 AG    409  

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