hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj25198/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4004  ( 422 res)   mfj25198

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Guanylate_cyc Adenylate and Guanylate cyclase catalyt    17.9    5.4e-08   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Guanylate_cyc   1/1     297   419 ..     1   223 []    17.9  5.4e-08

Alignments of top-scoring domains:
Guanylate_cyc: domain 1 of 1, from 297 to 419: score 17.9, E = 5.4e-08
                   *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD
                      +y +r++ V++l aDIvGFT+l+s++s    p e+v +LN+l+++FD
   mKIAA4004   297    LYVKRHQGVSVLYADIVGFTRLASECS----PKELVLMLNELFGKFD 339  

                   eLldehkfgvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaakl
                    ++ eh   + ++K++GD+Y+++sGlp                ++Ha  +
   mKIAA4004   340 QIAKEH--ECMRIKILGDCYYCVSGLPLS-------------LPDHAINC 374  

                   adfALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGlt
                   + ++Ldm  ai++  v   +                          ++  
   mKIAA4004   375 VRMGLDMCRAIRSALVCEQE--K-----------------------LR-- 397  

                   akrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefef
                                           pg     v e + +   +     ++ 
   mKIAA4004   398 -----------------------APG-----VGEGVREAGWQSS---WR- 415  

                   aleprgeveVkGkgkpGeietYfLkg<-*
                       rge                      
   mKIAA4004   416 ----RGE------------------S    419  

//