hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg15810/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA3020  ( 1884 res)   mbg15810

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     71.9      8e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1    1779  1884 .]     1    82 []    71.9    8e-17

Alignments of top-scoring domains:
PH: domain 1 of 1, from 1779 to 1884: score 71.9, E = 8e-17
                   *->vikeGwLlkks..k.swkkryfvLfn..gvLlyyksk...kpkgsip
                        +eG L+kk+   + wk r+fvL+ ++++L yy+ + ++++kg+i+
   mKIAA3020  1779    RSYEGILYKKGafMkPWKARWFVLDKtkHQLRYYDHRmdtECKGVID 1825 

                   Lsgcsvre.p..............cFeivt.drtlllqAeseeereeWve
                   L +++ + +  +  + ++  +++  F ++t+ r++ ++A +  ++++Wv+
   mKIAA3020  1826 LAEVEAVApGtptigapktvdekaFFDVKTtRRVYNFCAQDVPSAQQWVD 1875 

                   alqsaiaka<-*
                    +qs++++a   
   mKIAA3020  1876 RIQSCLSDA    1884 

//