hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/meh/meh02376/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA2034  ( 1729 res)   meh02376

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
MYSc     Myosin. Large ATPases.                         627.2   5.6e-184   1
IQ       Short calmodulin-binding motif containing co    28.4      0.001   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MYSc       1/1       1   534 [.     1   771 []   627.2 5.6e-184
IQ         1/1     535   557 ..     1    23 []    28.4    0.001

Alignments of top-scoring domains:
MYSc: domain 1 of 1, from 1 to 534: score 627.2, E = 5.6e-184
                   *->rnppkfegVeDmvlLtyLnEpavlhNLkkRYlkdlIYTYiGlvLvav
                                                                     
   mKIAA2034     -    ----------------------------------------------- -    

                   NPYkqlppiYtdevikkYrekkdldGksrgElpPHvFAiADeAYrnMlre
                                                                     
   mKIAA2034     - -------------------------------------------------- -    

                   keNQsIiISGESGAGKTEatKkimqYLAavsgsvesvedqiLesNPiLEA
                                                                     
   mKIAA2034     - -------------------------------------------------- -    

                   FGNAKTvRNnNSSRFGKfieIhFdekGkivGAkIenYLLEKSRVVsQakg
                                       I+Fd  G ivGA+Ie+YLLEKSR ++Qak+
   mKIAA2034     1 --------------------INFDIAGYIVGANIETYLLEKSRAIRQAKD 30   

                   ERNYHIFYQLLaGaseelkkelgLskFSkspedYkYLnqggtpfankrys
                   E ++HIFYQLL Ga e+lk  l+L++    ++ Y++L++g          
   mKIAA2034    31 ECSFHIFYQLLGGAGEQLKADLLLEP----CSHYRFLTNGP--------- 67   

                   sgcltvdgiDDaeeFkeTdEvtlkAmrvlGfseeEqesIFrilAAILHLG
                       + +     e F+eT E    ++rvlG+  eE+ +++r+++A+L  G
   mKIAA2034    68 ----SSSPGQERELFQETLE----SLRVLGLLPEEITAMLRTVSAVLQFG 109  

                   NieFeegrntgdnaavtslkvadeeelqkaAeLLgvdpeeLekaLtkRki
                   Ni  +++rn   ++a      +d +++qk+++LLg+ ++++ +aL++++i
   mKIAA2034   110 NIVLKKERN--TDQAT----MPDNTAAQKLCRLLGLGVTDFSRALLTPRI 153  

                   ktggeggsvitkplnveqAvyaRDALAKaiYsRLFdWLVkrINksl....
                   k+g++   ++ k++++eqA +a  ALAKa Y+RLF WLV r+N++l++++
   mKIAA2034   154 KVGRD---YVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALdrsp 200  

                   ..sayfIGVLDIyGFEiFekNSFEQfCINyaNEKLQQfFnqhvFKlEQEE
                   ++ a+f G+LDI+GFEiF+ NSFEQ+CINy+NEKLQQ+Fn+ +F+lEQEE
   mKIAA2034   201 rqGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEE 250  

                   YerEGIeWtfIdFfliDNQpciDLIEkKgkrPlGIlslLDEeClfHAqPk
                   Y+rEGI+Wtf dF+l D+QpciDLIE ++ +P+G+l+lLDEeC+f   Pk
   mKIAA2034   251 YQREGIPWTFLDFGL-DLQPCIDLIERPA-NPPGLLALLDEECWF---PK 295  

                   gTDqtFleKLnkalyhqhhkkhphfskprkSlkkgkpkkrfgrtaFiikH
                   +TD++F+eK       q  ++hp+f+ p         +  +++++F++ H
   mKIAA2034   296 ATDKSFVEKV-----AQEQGSHPKFQRP---------RNLRDQADFSVLH 331  

                   YAGdVtYnveGFLeKNkDtLfedlieLlqsSknpliasLFpeeadqsssa
                   YAG+V+Y +  +L KN+D+L++++ +Ll++S+++l a++++++++  +  
   mKIAA2034   332 YAGKVDYKASEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGL- 380  

                   akekssggagksrkagr.r.eps.kgtisskkrppTvGsqFk.sLneLme
                              +++ g +++ +++      +++++TvG+++k+sL+ Lm+
   mKIAA2034   381 ---------EQVSSLGDgPpGGRpR-----RGMFRTVGQLYKeSLSRLMA 416  

                   tLnstnPHFIRCIKPNeeKkpgvFdaslVlhQLrylGvLEniRIRraGFP
                   tL++tnP F+RCI PN+eK++g+ ++ lVl+QLr++GvLE+iRI+r GFP
   mKIAA2034   417 TLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFP 466  

                   yRlpfdeFlqRYkvLlpktwppwggewknrlfgdakkacealLqslglgi
                   +R+ f+eF+qRY+ +l ++  p+g       f+d k+ace+++q+l+   
   mKIAA2034   467 NRILFQEFRQRYE-ILTPNAIPKG-------FMDGKQACEKMIQALE--- 505  

                   egdnldeeeyqiGkTKvFlRnpgqlaeLEelRee<-*
                       ld++ y++G +K+F+R +g+la LEe+R+    
   mKIAA2034   506 ----LDPNLYRVGQSKIFFR-AGVLAQLEEERDL    534  

IQ: domain 1 of 1, from 535 to 557: score 28.4, E = 0.001
                   *->rleraAiiIQaawRGylaRkryk<-*
                      +++ +++ +Qaa+RGylaR+ ++   
   mKIAA2034   535    KVTDIIVSFQAAARGYLARRAFQ    557  

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