hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpg/mpg00908/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1994  ( 1058 res)   mpg00908

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TSC22    TSC-22/dip/bun family                          152.9    5.6e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TSC22      1/1     973  1032 ..     1    60 []   152.9  5.6e-42

Alignments of top-scoring domains:
TSC22: domain 1 of 1, from 973 to 1032: score 152.9, E = 5.6e-42
                   *->MDLVKsHLmyAVREEVEvLkeqIkeLveklnqLeeENtLLktnvSpE
                      MDLVKsHLmyAVREEVEvLkeqIkeL+ek++qLe+EN LLkt++SpE
   mKIAA1994   973    MDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 1019 

                   qLaqlqaqlqlae<-*
                   qLaq+qaqlq+++   
   mKIAA1994  1020 QLAQFQAQLQTGS    1032 

//