hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/meh/meh02207/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1964  ( 801 res)   meh02207

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PLCXc    Phospholipase C, catalytic domain (part); do   286.4    2.1e-81   1
PLCYc    Phospholipase C, catalytic domain (part); do   181.0    1.1e-49   1
C2       Protein kinase C conserved region 2 (CalB)      64.0    1.8e-14   1
PH       Pleckstrin homology domain.                     32.7    5.1e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      93   202 ..     1    82 []    32.7  5.1e-05
PLCXc      1/1     348   494 ..     1   182 []   286.4  2.1e-81
PLCYc      1/1     540   656 ..     1   119 []   181.0  1.1e-49
C2         1/1     673   779 ..     1    92 []    64.0  1.8e-14

Alignments of top-scoring domains:
PH: domain 1 of 1, from 93 to 202: score 32.7, E = 5.1e-05
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk.....kpkgsipL
                      +++   Llk  +++  k+r  +L ++ L+ + +++ ++ + k+++++
   mKIAA1964    93    MLRGSRLLKIRsRtWHKERLYRLQEDGLSVWFQRripraASKHIFFV 139  

                   sgc.svre.p................cFeivt.dr..tlllqAeseeere
                   ++++ vre++ +++ ++ ++   +  c++i +++r++ l l+A+++ee++
   mKIAA1964   140 QHIeAVREgHqseglrrfggafapacCLTIAFkGRrkNLDLAAPTAEEAQ 189  

                   eWvealqsaiaka<-*
                   +Wv+ l ++ a++   
   mKIAA1964   190 RWVRGLAKLRARL    202  

PLCXc: domain 1 of 1, from 348 to 494: score 286.4, E = 2.1e-81
                   *->qDmdkPLshYfInsSHNsGtfkidiFPFGLDAPEKLRLPPYVTFLLR
                      qDm++PL+hYfI+sSHN                              
   mKIAA1964   348    QDMGQPLAHYFISSSHN------------------------------ 364  

                   FTYLtgkQlwgessvegYiqaLkaGcRcvELDcwdgpdgePviyHGhTft
                    TYLt +Q++g+ss e+Yi+a  +GcRcvELDcw gp gePviyHGhT+t
   mKIAA1964   365 -TYLTDSQIGGTSSTEAYIRAFAQGCRCVELDCWEGPGGEPVIYHGHTLT 413  

                   skikLsdVleaIKkfAFvtSpyPEFvIlSLenHcspdqQakmaqmfkeiF
                   ski ++dV++a++++AF+ SpyP  vIlSLenHc+++qQa+ma+++++i+
   mKIAA1964   414 SKILFRDVIQAVRDHAFTSSPYP--VILSLENHCGLEQQAVMARHLRSIL 461  

                   gdlLytkPlts.seeypgsnLPsPe.qLkgKILLkgK<-*
                   gd+L+t  l+s++ e+    LPsPe+qLkg+IL+kgK   
   mKIAA1964   462 GDMLVTQALDSqNPEE----LPSPEqQLKGRILVKGK    494  

PLCYc: domain 1 of 1, from 540 to 656: score 181.0, E = 1.1e-49
                   *->lseLvsycapvkFrsfelaeekdnafyemsSfsEtkaakkllekapt
                      ls+L +yc +   r ++ +    + +  + S+sE+k a+k+ ++a+t
   mKIAA1964   540    LSALAVYCCATRLRTLDPSPGP-PQSCTVGSLSERK-ARKFTREAGT 584  

                   dfvryNqrqLsRvYPkGtRvDSSNYnPqvfWnaGcQMVALNfQTpDkaMq
                   +fvr+N +qL+RvYP G+R+ S NYnPq++Wn GcQ+VALNfQTp+ +M+
   mKIAA1964   585 SFVRHNTQQLTRVYPLGLRMNSANYNPQEMWNSGCQLVALNFQTPGYEMD 634  

                   lNqGmFraNGgCGYVLKPefLR<-*
                   lN G+F++NG+CGYVLKP +LR   
   mKIAA1964   635 LNTGRFLINGQCGYVLKPAYLR    656  

C2: domain 1 of 1, from 673 to 779: score 64.0, E = 1.8e-14
                   *->tLtvkiisArnLp...........DPYVkvs...........kTkvv
                      tL + ++ A++Lp+ +  ++++  DP V+v+ ++ + +  ++ T  v
   mKIAA1964   673    TLAIQVLTAQQLPklnaekpssivDPLVRVEihgvpedcaqkETDYV 719  

                   kktlsgfNPvWnEesetFeFevpp...s.LeieVyDk......dfiGrvt
                    +++  fNP W++   t++F +  ++   +++ V D+++++++df+G+ t
   mKIAA1964   720 LNNG--FNPCWEQ---TLQFRLRApelVlVRFVVEDYdttspnDFVGQST 764  

                   ippnnahqhsadglihlsell.ggrh.kl<-*
                   +p              ls+l++g+rh +l   
   mKIAA1964   765 LP--------------LSSLKqGYRHiHL    779  

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