hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj52228/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1963  ( 349 res)   mfj52228

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Glyco_transf_43 Glycosyltransferase family 43           438.1     8e-128   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Glyco_transf_43   1/1     127   334 ..     1   284 []   438.1   8e-128

Alignments of top-scoring domains:
Glyco_transf_43: domain 1 of 1, from 127 to 334: score 438.1, E = 8e-128
                   *->LanTLrlVpnpLHWIVVEDgegttplvsniLartGLptiythlvvkt
                      LanT+r+V + LHWI+VED+ ++++lvs +Lar+GLp  +thl+v+t
   mKIAA1963   127    LANTFRQVAQ-LHWILVEDRATRSELVSSFLARAGLP--NTHLHVPT 170  

                   PstyklrgdePnwvkPRGveQRnlALrwiRehssqilgdgdregVVYFAD
                   P++yk+      +++PR +eQRn++L+w+R+++++++ ++   gV++FAD
   mKIAA1963   171 PRRYKR------PWLPRATEQRNAGLAWLRQRHQHQSAQP---GVLFFAD 211  

                   DDNtYdLeLFeemIRnvkkvGvWpVGlLAqSGNAEEmVLmekrkemekee
                   DDNtY+LeLF+em R+++kv+vWpVG                        
   mKIAA1963   212 DDNTYSLELFQEM-RTTRKVSVWPVG------------------------ 236  

                   eelvgglrVEgPvvnkngtkVvgfhtvwkpeevRpFpvDMAGFAvNlkll
                     lvgg+r+E+P+v+ ng kVvg++t+w+++  RpF++DMAGFAv+l+++
   mKIAA1963   237 --LVGGRRYERPLVK-NG-KVVGWYTGWRED--RPFAIDMAGFAVSLQVI 280  

                   ldnpnAvFpfkvprggeGyqEssfLesLglldlddlEPlPAnnCtksvll
                   l+np+AvF++++++ + G+qEs+fL+++  ++ ++lEP+ A nCtk    
   mKIAA1963   281 LSNPKAVFKRRGSQ-P-GMQESDFLKQI--TTVEELEPK-ASNCTK---- 321  

                   wwLrvearadsklppgwiidpnrEILVWHTRTekpkl<-*
                                           +LVWHTRTek +l   
   mKIAA1963   322 ------------------------VLVWHTRTEKVNL    334  

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