hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mtk/mtk01075/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1959  ( 461 res)   mtk01075

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SH3      Src homology 3 domains                          48.0    1.2e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SH3        1/1      69   130 ..     1    58 []    48.0  1.2e-09

Alignments of top-scoring domains:
SH3: domain 1 of 1, from 69 to 130: score 48.0, E = 1.2e-09
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks....ddgWweGelnrt
                      e+ +++Y+y +qn+dEL + +GD i     +++++++gW +G+  +t
   mKIAA1959    69    ETLQVIYPYSPQNDDELELVPGDFIFMSPMEqtstSEGWIYGTSLTT 115  

                   GkeGlfPsnYVeeie<-*
                   G  Gl P nY+++ +   
   mKIAA1959   116 GCSGLLPENYITKAD    130  

//