hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mek/mek00570/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1952  ( 309 res)   mek00570

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
hATC     hAT family dimerisation domain                  18.4     0.0025   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
hATC       1/1     228   308 ..     1    94 []    18.4   0.0025

Alignments of top-scoring domains:
hATC: domain 1 of 1, from 228 to 308: score 18.4, E = 0.0025
                   *->ELdkYlselpvlprnteprgledfdvLeWWkeaqnssryPiLsklAr
                      E+ +Yl+e p+++  +        d+ ++W+  +  ++   L klA+
   mKIAA1952   228    EVYDYLQE-PLFQATP--------DLFQYWS--CVTQKHTKLAKLAF 263  

                   diLsiPvssaasErsFStgklgrvldesrnrlepenveaLlcledwl<-*
                    +L++P+  a s  +        +l ++r+ l pe  ++L++l++++   
   mKIAA1952   264 WLLAVPAVGARSGCVNMCE--QALLIKRRRLLSPEDMNKLMFLKSNM    308  

//