hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj32047/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1914  ( 835 res)   mfj32047

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     93.3      3e-23   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/2     186   283 ..     1    82 []    44.8  1.1e-08
PH         2/2     364   459 ..     1    82 []    49.7  3.8e-10

Alignments of top-scoring domains:
PH: domain 1 of 2, from 186 to 283: score 44.8, E = 1.1e-08
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk...kpkgsipLsg
                        ++ +L +k+ +++w k  +v+++ +Ll+yks+++++p+  ++L+g
   mKIAA1914   186    ARICAFLWRKKwLgQWAKQLCVIRDTRLLCYKSSkdhSPQLDVNLRG 232  

                   csvre.p........cFeivt.dr.tlllqAeseeereeWvealqsaiak
                    sv+++++  +++++ ++i+  + ++++l   s++++e+W++ +q+++  
   mKIAA1914   233 SSVVHkEkqvrkkghKLKITPmNAdVIVLGLQSKDQAEQWLRVIQEVSGL 282  

                   a<-*
                       
   mKIAA1914   283 P    283  

PH: domain 2 of 2, from 364 to 459: score 49.7, E = 3.8e-10
                   *->vikeGwLlkksk.swkkryfvLfngvLlyyksk....kpkgsipLsg
                      ++ + +L ++ +++wk r+++++++ L++y+++++++  + +++L g
   mKIAA1914   364    LETSSYLNVLVNsQWKSRWCFVRDSHLHFYQDRnrskVAQQPLSLVG 410  

                   csvre.p......cFeivt.dr.tlllqAeseeereeWvealqsaiaka<
                   c v ++p++++  +F+i +++++   l A+s+ee+  W+  l s + +  
   mKIAA1914   411 CDVLPdPspdhlySFRILHnGEeLAKLEAKSSEEMGHWLGLLLSESGSK  459  

                   -*
                     
   mKIAA1914     -    -    

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