hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj32047/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1914  ( 835 res)   mfj32047

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       PH domain                                      101.4    1.8e-26   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/2     186   281 ..     1    92 []    43.9  3.5e-09
PH         2/2     364   457 ..     1    92 []    58.7  1.2e-13

Alignments of top-scoring domains:
PH: domain 1 of 2, from 186 to 281: score 43.9, E = 3.5e-09
                   *->vikeGwLlkkggkkswkkRyfvLfndvLlyykdkk.kkpkgsipLsg
                        ++ +L++k ++++w k  +v+++++Ll+yk++k+++p+  ++L+g
   mKIAA1914   186    ARICAFLWRKKWLGQWAKQLCVIRDTRLLCYKSSKdHSPQLDVNLRG 232  

                   iqvekvpdn..krkncFeirt.dretlllqaeseeerkeWvkaiqsair<
                   ++v++ +++ +k+ + ++i+  + ++++l   s +++++W++ iq+++  
   mKIAA1914   233 SSVVHKEKQvrKKGHKLKITPmNADVIVLGLQSKDQAEQWLRVIQEVSG  281  

                   -*
                     
   mKIAA1914     -    -    

PH: domain 2 of 2, from 364 to 457: score 58.7, E = 1.2e-13
                   *->vikeGwLlkkggkkswkkRyfvLfndvLlyykdkk..kkpkgsipLs
                      ++ + +L +   +++wk R+++++++ L++y+d++++k  +  ++L 
   mKIAA1914   364    LETSSYLNVLV-NSQWKSRWCFVRDSHLHFYQDRNrsKVAQQPLSLV 409  

                   giqvekvpdnkrkncFeirt.dretlllqaeseeerkeWvkaiqsair<-
                   g+ v ++p++++ ++F+i ++++e   l+a+s+ee+ +W+  + s++   
   mKIAA1914   410 GCDVLPDPSPDHLYSFRILHnGEELAKLEAKSSEEMGHWLGLLLSESG   457  

                   *
                    
   mKIAA1914     -   -    

//