hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mng/mng06308/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1903  ( 827 res)   mng06308

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Myb_DNA-binding Myb-like DNA-binding domain              23.2     0.0062   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Myb_DNA-binding   1/1     572   621 ..     1    65 []    23.2   0.0062

Alignments of top-scoring domains:
Myb_DNA-binding: domain 1 of 1, from 572 to 621: score 23.2, E = 0.0062
                   *->rgrWtaeEdellveavekhGkgfg.IrlsltkanWkkIaeklgpgss
                       ++W+++E ++l  a+  ++k+ ++         W+ +a  +g    
   mKIAA1903   572    DEEWSEQELQKLHCAFTSLPKHKPgF--------WSDVAMAVG---- 606  

                   nnvlgrtaeqcklryykyk<-*
                       +rta +c+ +y       
   mKIAA1903   607 ----SRTADECQKKYTEEP    621  

//