hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg07308/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1867  ( 172 res)   mbg07308

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
IG       Immunoglobulin                                  47.7    1.6e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
IG         1/1      16   106 ..     1    58 []    47.7  1.6e-09

Alignments of top-scoring domains:
IG: domain 1 of 1, from 16 to 106: score 47.7, E = 1.6e-09
                   *->pp.vtvkeGesvtLtC.as....titWy...................
                      p++++v+ G++vtL C ++  ++ + W +++   + +++ ++ ++  
   mKIAA1867    16    PQdQVVVSGQPVTLLCaIPeydgFVLWIkdglalgvgrdlssypqyl 62   

                   ...........LtI.nvtpeDsesgGtYtCaat.sgsasseqgttLtVl<
                     +++ ++ ++L I +++++D    ++Y C+a  +   s   +++LtVl 
   mKIAA1867    63 vvgnhlsgehhLKIlRAELQDD---AVYECQAIqAAIRSR--PARLTVL  106  

                   -*
                     
   mKIAA1867     -    -    

//