hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm09063/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1815  ( 895 res)   mpm09063

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Peptidase_M28 Peptidase family M28                      265.6    6.5e-76   1
Peptidase_M20 Peptidase family M20/M25/M40                0.8     0.0094   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Peptidase_M28   1/1     189   360 ..     1   225 []   265.6  6.5e-76
Peptidase_M20   1/1     192   368 ..     1   280 []     0.8   0.0094

Alignments of top-scoring domains:
Peptidase_M28: domain 1 of 1, from 189 to 360: score 265.6, E = 6.5e-76
                   *->evlllgAHyDSvpvgkdapgdsgeigpGAtDnAsGvAvlLElARvLa
                       ++l ++H+DSv            ++pGA D+A+ +Av+LE++Rv+ 
   mKIAA1815   189    SAILANCHFDSVA-----------NSPGASDDAVSCAVMLEVLRVMS 224  

                   aqqgpqpekrsvvFlffgAEEAfeeWpdGLlGShafaekWelPphkelkk
                   a ++ ++ ++ vvFlf+gAEE      + L++Sh+f+    + +h++++ 
   mKIAA1815   225 A-SPEPM-QHAVVFLFNGAEE------NVLQASHGFI----T-QHPWASL 261  

                   iraviNLDmiGsggpallfqggpTanaygnlpsIErLllllleayleaaa
                   ira+iNL+++G gg++l+fq+gp      ++p+     l  ++ay +aa+
   mKIAA1815   262 IRAFINLEAAGVGGKELVFQTGP------ENPW-----L--VQAYVSAAK 298  

                   hpfgttlgldvfqegggpgrsDhapFlndkaGvPgldlaagpnkdgqaag
                   hpf+++++++vfq+g++p+++D+++++ d +++Pg+dla+++n       
   mKIAA1815   299 HPFASVVAQEVFQSGIIPSDTDFRIYR-DFGNIPGIDLAFIEN------- 340  

                   ggtagdafgpvYHTpaDtldnidldtlq<-*
                           g+ YHT++Dt+d+i  d++q   
   mKIAA1815   341 --------GYIYHTKYDTADRILIDSIQ    360  

Peptidase_M20: domain 1 of 1, from 192 to 368: score 0.8, E = 0.0094
                RF    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   *->llraHmDvVPiqEdetgwrpyaStfdPFlvekdgrWddsPFpteegG
                      l + H+D V                                      
   mKIAA1815   192    LANCHFDSVA------------------------------------- 201  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   vpGvprigrmhgrGhdDhkggllaalealaalkaaggklkgtvkllfqpd
                   +           +G+ D+  + + +le+l+ + a+ ++ ++ v++lf ++
   mKIAA1815   202 N----------SPGASDDAVSCAVMLEVLRVMSASPEPMQHAVVFLFNGA 241  

                RF xxxx   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   EEgg...gfglaallgskeaglgkadveliGaramiedGsleALrGyhad
                   EE   + ++g+                      +++              
   mKIAA1815   242 EENVlqaSHGFI------------------TQHPWASL------------ 261  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  
                   dpagveGalefgvdaifglHvwpdlgvvGEptgrpgvlagvVtvhivg..
                                         + + + +E +g  g            + 
   mKIAA1815   262 ----------------------IRAFINLEAAGVGG---------KELvf 280  

                RF    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   xxxxxxx
                   ...tvndplvaalrealakelglgeenvvdgpepepsggg...eDaaffa
                    ++++n+ lv+a  +a ak  ++ +  v +  e+  sg  ++++D+++++
   mKIAA1815   281 qtgPENPWLVQAYVSA-AK--HPFASVVAQ--EVFQSGIIpsdTDFRIYR 325  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   
                   ekvpglgfpmlgvGpgdlaHspnEyvdeddlekgaevlarllee<-*
                    +  ++g++  ++ +g++ H+ ++++ ++ l   ++   + +++   
   mKIAA1815   326 DFGNIPGIDLAFIENGYIYHT-KYDTADRILIDSIQRAGDNILA    368  

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