hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm08259/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1791  ( 1452 res)   mpm08259

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
S_TKc    Serine/Threonine protein kinases, catalytic    326.5    1.8e-93   1
TyrKc    Tyrosine kinase, catalytic domain               29.7    5.6e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
S_TKc      1/1     706   999 ..     1   231 []   326.5  1.8e-93
TyrKc      1/1     706   999 ..     1   280 []    29.7  5.6e-13

Alignments of top-scoring domains:
S_TKc: domain 1 of 1, from 706 to 999: score 326.5, E = 1.8e-93
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.........erilr
                      ++++ ++G+G++G+Vy+ardk+tg+ vA+K+++ ++++++ +++++r
   mKIAA1791   706    FDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRldnekegfpITAIR 752  

                   EikiLkk.dHPNIVkLydvfed...........dklylVmEyceGdlGdL
                   EikiL++  H  I++++++  d+++  + +++++ +ylV+Ey+++   dL
   mKIAA1791   753 EIKILRQlTHQSIINMKEIVTDkedaldfkkdkGAFYLVFEYMDH---DL 799  

                   fdllkkrgrrglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNi
                   + ll++   +     ++E+++++++rQ+ ++L+Y+H+++++HRD+K +Ni
   mKIAA1791   800 MGLLESGLVH-----FNEnHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNI 844  

                   LLds..hvKlaDFGlArql........ttfvGTpeYmAPEvl....gYgk
                   LL++++++KlaDFGlAr+++++++++ t  v T++Y++PE+l +++ Y++
   mKIAA1791   845 LLNNrgQIKLADFGLARLYsseesrpyTNKVITLWYRPPELLlgeeRYTP 894  

                   pavDiWSlGcilyElltGkpPFp......qldlifkkig...........
                    a+D+WS+Gcil El+t kp F+ +++  ql+li +++g++ +  +++  
   mKIAA1791   895 -AIDVWSCGCILGELFTKKPIFQanqelaQLELISRICGspcpavwpdvi 943  

                   .........................SpeakdLikklLvkdPekRlta.ea
                   + ++ ++ ++++ ++++ +++    +  a+dL + +L  dP+kR ta++a
   mKIAA1791   944 klpyfntmkpkkqyrrklreefvfiPAAALDLFDYMLALDPSKRCTAeQA 993  

                   LedeldikaHPff<-*
                   L+        +f+   
   mKIAA1791   994 LQ-------CEFL    999  

TyrKc: domain 1 of 1, from 706 to 999: score 29.7, E = 5.6e-13
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda.....keeFlr
                         + ++GeG +G+Vyk++ k+++++VA K+++ d ++++     +r
   mKIAA1791   706    FDIIGIIGEGTYGQVYKARDKdtgEMVALKKVRLDNekegfPITAIR 752  

                   EakiMkklGgkHpNiVkLlGvcteegrr..F.mevePlmivmEymegGdL
                   E+ki+++l   H+ i+++  ++t+++   +F+   +  ++v+Eym++ dL
   mKIAA1791   753 EIKILRQL--THQSIINMKEIVTDKEDAldFkKDKGAFYLVFEYMDH-DL 799  

                   ldyLrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgen
                      L +   +++  +  sf+ Q  +G +Y ++knf HRD+ + N+L++++
   mKIAA1791   800 MGLLESGLVHFNENHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNR 849  

                   kvvKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEsl.
                   +++K +DFGL+R   ++    es  y       ++   + +   +PE l 
   mKIAA1791   850 GQIKLADFGLARLYSSE----ESRPYT------NKV--ITLWYRPPELLl 887  

                   kdgkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneev..leylkk
                    + ++t++ DVWS G  L E+ft  ++P          n+e+ +le++ +
   mKIAA1791   888 GEERYTPAIDVWSCGCILGELFT--KKPIFQ------ANQELaqLELISR 929  

                   GyRlpkPendlpiS...........................s.vtCPdel
                       p+P+      ++  + +  ++ +++++ +++ +++  + + +  +l
   mKIAA1791   930 ICGSPCPAV----WpdviklpyfntmkpkkqyrrklreefvFiPAAALDL 975  

                   YdlMlqCWaedPedRPtFsel..verl<-*
                   +d Ml   a dP++R+t ++  ++e+l   
   mKIAA1791   976 FDYML---ALDPSKRCTAEQAlqCEFL    999  

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