hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbr/mbr06358/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1789  ( 605 res)   mbr06358

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
zf-C2H2  Zinc finger, C2H2 type                          22.1      0.014   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
zf-C2H2    1/1     136   160 ..     1    24 []    22.1    0.014

Alignments of top-scoring domains:
zf-C2H2: domain 1 of 1, from 136 to 160: score 22.1, E = 0.014
                   *->ykCpfdCgksFsrksnLkrHlrt..H<-*
                      y+C+ +C  +F++ + +++H++ ++H   
   mKIAA1789   136    YVCH-ICSITFTSLHMFRSHMQGteH    160  

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