hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mph/mph01357/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1785  ( 617 res)   mph01357

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                203.8    1.6e-56   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/9       2    31 ..     1    30 []     2.8    2e+03
ANK        2/9      40    70 ..     1    30 []    30.3  0.00027
ANK        3/9      82   111 ..     1    30 []    26.1   0.0047
ANK        4/9     115   144 ..     1    30 []    27.4   0.0019
ANK        5/9     148   177 ..     1    30 []    38.0  1.3e-06
ANK        6/9     181   210 ..     1    30 []    27.7   0.0016
ANK        7/9     213   243 ..     1    30 []    15.1       10
ANK        8/9     481   523 ..     1    30 []    15.1      9.8
ANK        9/9     527   556 ..     1    30 []    33.3  3.2e-05

Alignments of top-scoring domains:
ANK: domain 1 of 9, from 2 to 31: score 2.8, E = 2e+03
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d +T+   Aa+ g l ++  Ll ++   ++   
   mKIAA1785     2    DLKTAVFNAARDGKLRLLTKLLASKSKAEV    31   

ANK: domain 2 of 9, from 40 to 70: score 30.3, E = 0.00027
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G TpL +Aa++g+l++v++Ll+    +i++   
   mKIAA1785    40    NGATPLLMAARYGHLDMVEFLLEQCSaSIEV    70   

ANK: domain 3 of 9, from 82 to 111: score 26.1, E = 0.0047
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G  pL+ A + g+l+vv+ Ll++ga++n    
   mKIAA1785    82    EGAPPLWAASAAGHLKVVQSLLNHGASVNN    111  

ANK: domain 4 of 9, from 115 to 144: score 27.4, E = 0.0019
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       + TpL  A+  g+le+vk+L++++ad+++   
   mKIAA1785   115    TNSTPLRAACFDGHLEIVKYLVEHKADLEV    144  

ANK: domain 5 of 9, from 148 to 177: score 38.0, E = 1.3e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+T+L++ +++g++e++++Ll+kgad+n    
   mKIAA1785   148    HGHTCLMISCYKGHKEIAQYLLEKGADVNR    177  

ANK: domain 6 of 9, from 181 to 210: score 27.7, E = 0.0016
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LH +ae+g+l+++k+Ll + a +++   
   mKIAA1785   181    KGNTALHDCAESGSLDIMKMLLMYCAKMEK    210  

ANK: domain 7 of 9, from 213 to 243: score 15.1, E = 10
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G+TpL  A  +g+ ++v +L  +  ++ ++   
   mKIAA1785   213    YGMTPLLSASVTGHTNIVDFLTHHAQtSKTE    243  

ANK: domain 8 of 9, from 481 to 523: score 15.1, E = 9.8
                   *->dGrTpLHlAaen.............gnlevvklLldkgadina<-*
                      ++++pLHlA+ ++++  ++ +  +  +l v  +L++ gad+n+   
   mKIAA1785   481    NNFSPLHLAVDKnttcvgrypvckfPSLQVTAILIECGADVNV    523  

ANK: domain 9 of 9, from 527 to 556: score 33.3, E = 3.2e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d+++pLH+Aa n+++++++lL+++ga ++a   
   mKIAA1785   527    DDNSPLHIAALNNHPDIMNLLIKSGAHFDA    556  

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