hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mej/mej00370/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1783  ( 869 res)   mej00370

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SH3      Src homology 3 domains                          41.0    1.6e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SH3        1/1     779   836 ..     1    58 []    41.0  1.6e-07

Alignments of top-scoring domains:
SH3: domain 1 of 1, from 779 to 836: score 41.0, E = 1.6e-07
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks..ddgWweGelnrtGk
                      +yv+Al +y  ++   LsF++GD i++l  ++ ++gW  G  +  G+
   mKIAA1783   779    GYVIALRSYITDDNSLLSFHRGDLIRLLPVTtlEPGWQFGSAG--GR 823  

                   eGlfPsnYVeeie<-*
                    GlfP   V++     
   mKIAA1783   824 SGLFPDDVVQPAA    836  

//