hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg08859a/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1771  ( 727 res)   mbg08859a

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Ded_cyto Dedicator of cytokinesis                       433.9   1.4e-126   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Ded_cyto   1/1     517   696 ..     1   192 []   433.9 1.4e-126

Alignments of top-scoring domains:
Ded_cyto: domain 1 of 1, from 517 to 696: score 433.9, E = 1.4e-126
                   *->tyFernnnvrrFmyetPFTknGtAtkaQGeleEQwKRkTiLttensF
                      tyF++n+n+rrFmy+tPFT++G   +a+Gel+EQ+KRkTiLtt+++F
   mKIAA1771   517    TYFDKNYNLRRFMYCTPFTLDG---RAHGELHEQFKRKTILTTSHAF 560  

                   PyiktRilVisreeielsPIEVAIedIqkKtaeLaaainqppadtlpdik
                   PyiktR++V+++eei+l+PIEVAIed+qkKt+eLa+a++q+p    +d+k
   mKIAA1771   561 PYIKTRVNVTHKEEIILTPIEVAIEDMQKKTQELAFATHQDP----ADPK 606  

                   mLQmvLQGSVgvtVNaGPLevAraFLseepLkadplGrPpdkhinkLrlv
                   mLQmvLQGSVg+tVN+GPLevA++FLse+p  +dp+   +++h+nkLrl+
   mKIAA1771   607 MLQMVLQGSVGTTVNQGPLEVAQVFLSEIP--GDPK---LFRHHNKLRLC 651  

                   freFikrCkrALevnkrLIgeDQkEYqreLkeNYekLkeeLsplI<-*
                   f++F+krC++AL++nk+LIg+DQkEYqreL++NY++Lke+L+plI   
   mKIAA1771   652 FKDFTKRCEDALRKNKSLIGPDQKEYQRELERNYHRLKEALQPLI    696  

//