hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm02096/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1764  ( 1034 res)   mpm02096

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
LRR_SD22 Leucine-rich repeat, SDS22-like subfamily       34.3    1.7e-05   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
LRR_SD22   1/3      67    88 ..     1    22 []    22.9    0.044
LRR_SD22   2/3      89   110 ..     1    22 []    15.0       11
LRR_SD22   3/3     111   132 ..     1    22 []     4.1  2.6e+02

Alignments of top-scoring domains:
LRR_SD22: domain 1 of 3, from 67 to 88: score 22.9, E = 0.044
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                        nL++LdLs+N+I++iE+L++   
   mKIAA1764    67    IWNLRHLDLSSNQISQIEGLNT    88   

LRR_SD22: domain 2 of 3, from 89 to 110: score 15.0, E = 11
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                      Lt+L +L Ls N+I+ +E+L+    
   mKIAA1764    89    LTKLCTLNLSCNLITRVEGLEA    110  

LRR_SD22: domain 3 of 3, from 111 to 132: score 4.1, E = 2.6e+02
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                      L nL+ L Ls N I  +++L     
   mKIAA1764   111    LVNLTKLNLSYNHINDLSGLMP    132  

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