hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg04392/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1761  ( 760 res)   mbg04392

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
N1221    N1221-like protein                             521.4   6.5e-153   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
N1221      1/1      48   361 ..     1   385 []   521.4 6.5e-153

Alignments of top-scoring domains:
N1221: domain 1 of 1, from 48 to 361: score 521.4, E = 6.5e-153
                   *->eaarlekrlsspassqpaldfeltdfdgleDELsEwFdytfWeylel
                      e++r+++++s+++s++p+l+fe++d+d++++EL+E+++yt  e +e+
   mKIAA1761    48    EFNRNQRKDSEGYSESPDLEFEYADTDKWAAELAELYSYT--EGPEF 92   

                   gqnkkcFekLRkydqpslfsedenyqsldldqkRnfvlkLldeLevssrs
                    +n+kcFe+    d+++++s+++ +++ld++q+R+++++Lld Lev++r+
   mKIAA1761    93 LMNRKCFEE----DFRIHVSDKK-WTELDTNQHRTHAMRLLDGLEVTARE 137  

                   lrnkalrallYIAqGtfaevvkaaLPnfadhkvrtSieehlqsiRrNvll
                   +r+k++ra+lY+AqGtf+e+              +S++e++ ++R+N++l
   mKIAA1761   138 KRLKVARAILYVAQGTFGEC--------------SSEAEVQFWMRYNIFL 173  

                   LlelgllseivelFkkeiedgrisKAsaracRdsnlnlardteKWRTRQL
                   Lle+g+++++vel+++ei+++++   +++a+R+++++la++t+       
   mKIAA1761   174 LLEVGTFNALVELLNMEIDNSAA---CSSAVRKPAISLADSTD------- 213  

                   PTmVDNElLrvlltiLYfitevildeRendeeevdDLetRkafiaelneP
                           Lrvll+i+Y+i+e++++++++d++e++  ++R++f+ael +P
   mKIAA1761   214 --------LRVLLNIMYLIVETVHQDCDGDKAEWR--TMRQTFRAELGSP 253  

                   veNgepLvefLtdmiekfrwgsDKrlhfpitqvGttfGiPGaanqhrmLm
                   ++N+ep++++L++m++kf++g+  ++hfp+                    
   mKIAA1761   254 LYNNEPFAIMLFGMVTKFCSGH--APHFPM-------------------- 281  

                   kkvilLLfKvllLqfGgfEelsvlKeeKrsiagLhnikedsikveksmla
                   kkv+lLL+K++l+++GgfEel+++K+eKr ++gL++++edsikv+++m+a
   mKIAA1761   282 KKVLLLLWKTVLCTLGGFEELQSMKAEKRTLLGLPPLPEDSIKVIRNMRA 331  

                   aSPldyeafReeitrApppsrFpsrgmpasklpldvDn<-*
                   aSP++++++++e++        ++rg++++k ++++Dn   
   mKIAA1761   332 ASPPASASDLIEQQ--------QKRGRREHKALIKQDN    361  

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