hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mic/mic23055/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1758  ( 1565 res)   mic23055

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                149.2    4.2e-40   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/6     697   727 ..     1    30 []    11.9       94
ANK        2/6     731   760 ..     1    30 []    31.4  0.00013
ANK        3/6     764   793 ..     1    30 []    31.5  0.00011
ANK        4/6     797   826 ..     1    30 []    35.5  7.1e-06
ANK        5/6     830   859 ..     1    30 []    20.8     0.19
ANK        6/6     899   929 ..     1    30 []    22.1    0.078

Alignments of top-scoring domains:
ANK: domain 1 of 6, from 697 to 727: score 11.9, E = 94
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                         T L  Aa+ gn+ ++ +Ll++ + din+   
   mKIAA1758   697    GRPTLLQQAAAQGNVTLLSMLLNEEGlDINY    727  

ANK: domain 2 of 6, from 731 to 760: score 31.4, E = 0.00013
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+++L+ Aa+ng+ ++v+lLl++ a ++a   
   mKIAA1758   731    DGHSALYSAAKNGHTDCVRLLLNAEARVDA    760  

ANK: domain 3 of 6, from 764 to 793: score 31.5, E = 0.00011
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+TpL +Aa+ g+ e+++lL  ++a+in    
   mKIAA1758   764    NGFTPLCVAAAQGHFECIELLTAYNANINH    793  

ANK: domain 4 of 6, from 797 to 826: score 35.5, E = 7.1e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+TpL+lA++ngn+e++klLl++g d  +   
   mKIAA1758   797    GGQTPLYLACKNGNKECIKLLLEAGTDRSI    826  

ANK: domain 5 of 6, from 830 to 859: score 20.8, E = 0.19
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+Tp+H A+ +gn++ +klL+ + +  +    
   mKIAA1758   830    DGWTPIHAAVDTGNVDSLKLLMYHRVRAHG    859  

ANK: domain 6 of 6, from 899 to 929: score 22.1, E = 0.078
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G+T+ H+Aa++g +++++ L ++g+ +++    
   mKIAA1758   899    EGWTAAHIAASKGFKNCLEVLCRHGGlEPER    929  

//