hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj01371/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1750  ( 415 res)   mfj01371

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
NAP      Nucleosome assembly protein (NAP)               80.0      5e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
NAP        1/1     205   390 ..     1   293 []    80.0    5e-20

Alignments of top-scoring domains:
NAP: domain 1 of 1, from 205 to 390: score 80.0, E = 5e-20
                   *->keRieaLKnlQvehdelEakFyeEvlkLEqKYaklYqPlfeKRreII
                          + L ++Q ++  ++a++ +  l L +K+ +l+    e+R    
   mKIAA1750   205    ---MDTLETVQLKLETMNAQADRAYLRLSRKFGQLRLHHLERR---- 244  

                   nGvvEPteeeiewkseeeesleEeeelvdEDgelaeeekakeaveeekee
                                                             ++ +    
   mKIAA1750   245 ----------------------------------------NLLIQS---- 250  

                   eeEdpKGIPnFWLTalkNvdlvsemitEeDEpiLkyLkDIkvkesedGep
                          IP+FW  a+ N++++s+ +   D ++L+yL++++v+e+    +
   mKIAA1750   251 -------IPGFWGQAFQNHPQLSAFLNTKDKEVLSYLNRLEVEELGL-AR 292  

                   sGFkLeFhFDsaNpYFtNkVLTKtYhlkseldpsDPfsFegpeiekaeGc
                    G+k+ F+F   NpYF NkVL K+Y  +    ps       +  + + + 
   mKIAA1750   293 LGYKIKFYFGR-NPYFQNKVLIKEYGCG----PS-------GQ-VVSRSA 329  

                   eIdWkkgKnNlTvktikKKQkhKgrgtvRtitktvpndSFFNFFsPpkvp
                   +I+W +g +   + + k      + +++          SFF +Fs + + 
   mKIAA1750   330 PIQWLPGHD--LQSLSK----ENPENNG----------SFFGWFSNHSSI 363  

                   dEdeDqeeeldEDleelLelDyeIGeviRDrIIPrAVlyFtgeaie<-*
                   +                   ++ I e i ++++P++++y++        
   mKIAA1750   364 E-------------------SDKIVEIINEDLWPNPLQYYLISEEA    390  

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