hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04593/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1747  ( 788 res)   mbh04593

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
MACPF    MAC/Perforin domain                            172.3    8.1e-48   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MACPF      1/1      90   286 ..     1   255 []   172.3  8.1e-48

Alignments of top-scoring domains:
MACPF: domain 1 of 1, from 90 to 286: score 172.3, E = 8.1e-48
                   *->kksfllvkatvelatykyetslrksdslmLtdeFlkavksLPkeYny
                      ++++++++a+++++++ +e+ +++s++l+L++eF+++++ L +++n+
   mKIAA1747    90    RYRIYREFARWKVNNLALERRDFFSLPLPLAPEFVRNIRLLGRRPNL 136  

                   leKestkvsdmennlkSekCgsvqaYmrfiekYGTHyitsgslGGeyeqv
                                         +q  +++i+kYGTH++ s++lGGe +++
   mKIAA1747   137 ----------------------QQVTENLIKKYGTHFLLSATLGGEESLT 164  

                   vrldksklednglteeevkaclkaefkisffvettkaglsvdgksskssc
                   +++dk+kl+++++                     t+ g+ v g+  +ss+
   mKIAA1747   165 IFVDKRKLSRKSE---------------------TTGGIPVVGGPGNSSA 193  

                   kessnsekeessfssgvedlvslvrGGssesigalaieYWglpgpdglde
                   +++++ ++ ++s+++++e++ ++++++++ ++++ ++e  +++gp+g+++
   mKIAA1747   194 VSLETLHQLAASYFIDRESTLRRLHHIQIATGAIKVTE--TRTGPLGCSN 241  

                   etyseWaesVkdnPvpIdyklePlheLlpprdvpcahtaklknkrenLer
                   +++ +  +sV  +   ++++l  l+ Llp+             +re++  
   mKIAA1747   242 YDNLDSVSSVLVQSPENKVQLLGLQVLLPEH------------LRERFVA 279  

                   AleeCYln<-*
                   A    Y++   
   mKIAA1747   280 AALS-YIT    286  

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