hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm03353/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1735  ( 484 res)   mpm03353

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DIX      DIX domain                                      87.8    2.2e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DIX        1/1     399   481 ..     1    87 []    87.8  2.2e-22

Alignments of top-scoring domains:
DIX: domain 1 of 1, from 399 to 481: score 87.8, E = 2.2e-22
                   *->csetKViYhLDdEetPYlvkvpvpaervTLgdFKevLtkrngsYKYy
                       + tKV Y+ D   tP +v +p + + vTL dFK++  ++ g+ +Y 
   mKIAA1735   399    STCTKVLYFTDRSLTPFMVNIPKRLGEVTLKDFKAAIDRE-GNHRYH 444  

                   fKslDpDfdCgvVKeEirdDsarLrPcfNgrvvswLvsve<-*
                   fK+lDp+f  g VKeE++ D +   P  +g++v w++      
   mKIAA1735   445 FKALDPEF--GTVKEEVFHDDDAI-PGWEGKIVAWVEEDH    481  

//