hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg04146/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1724  ( 406 res)   mbg04146

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
CDP-OH_P_transf CDP-alcohol phosphatidyltransferase      36.7    5.4e-07   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
CDP-OH_P_transf   1/1     113   300 ..     1   165 []    36.7  5.4e-07

Alignments of top-scoring domains:
CDP-OH_P_transf: domain 1 of 1, from 113 to 300: score 36.7, E = 5.4e-07
                   *->llLfllaallDalDGylARktgnqvSrfGafLDplaDkisdglalla
                      ++L + a  lD++DG++AR+t n ++++G+++D+ +D++s++ ++++
   mKIAA1724   113    GILNFAAYTLDGVDGKQARRT-NSSTPLGELFDHGLDSWSCVYFVVT 158  

                   layagpvllpgwltldlllvilarfilvsalrlarayvgavge.......
                   ++    ++  g + +++++++l++ +++ ++ l++++++++g    + + 
   mKIAA1724   159 VYS---IFGRGPTGVSVFVLYLLLWVVLFSFILSHWEKYNTGVlflpwgy 205  

                   ................................aaflggkiktaeqiliil
                   + ++ + +     +   + +   ++   +   + ++  +i   ++++ + 
   mKIAA1724   206 disqvtisfvyivtavvgveawyepflfnflyRDLFTAMIIGCALCVTLP 255  

                   lllllgigppnsklsg.lglanwllalglvlaallfilqmgviaailtli
                   + ll+      s +s +l +   + a+++ ++++         ++++tl 
   mKIAA1724   256 MSLLNFFR---SYKSNtLKHKSVYEAMVP-FFSP---------CLLFTLC 292  

                   svleylla<-*
                   +v++++ +   
   mKIAA1724   293 TVWILWSP    300  

//