hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm03365/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1721  ( 1149 res)   mpm03365

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     19.7      0.068   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/2     129   165 ..     1    36 []     9.3       12
HEAT       2/2     998  1034 ..     1    36 []    10.6      8.2

Alignments of top-scoring domains:
HEAT: domain 1 of 2, from 129 to 165: score 9.3, E = 12
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +   ++++  + +l+++ +p V+  A++ L al++ +   
   mKIAA1721   129    SiDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEF    165  

HEAT: domain 2 of 2, from 998 to 1034: score 10.6, E = 8.2
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e+l ++l+  l  ++++ ++eV + ++eaL  lae++   
   mKIAA1721   998    EdLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQC    1034 

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