hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbj/mbj00321/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1716  ( 277 res)   mbj00321

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                 38.6    8.5e-07   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/2     144   173 ..     1    30 []    25.6   0.0071
ANK        2/2     177   206 ..     1    30 []    13.0       42

Alignments of top-scoring domains:
ANK: domain 1 of 2, from 144 to 173: score 25.6, E = 0.0071
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+TpL  A+  g+l v+++Ll++gad+n    
   mKIAA1716   144    EGKTPLVQAVLGGSLIVCEFLLQNGADVNQ    173  

ANK: domain 2 of 2, from 177 to 206: score 13.0, E = 42
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       Gr pLH+A   g+   v l+l++gad +a   
   mKIAA1716   177    LGRAPLHHATLLGRTGQVCLFLKRGADQHA    206  

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