hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp08127/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1695  ( 1294 res)   mbp08127

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FH2      Formin Homology 2 Domain                       254.8    7.1e-72   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FH2        1/1     755  1208 ..     1   499 []   254.8  7.1e-72

Alignments of top-scoring domains:
FH2: domain 1 of 1, from 755 to 1208: score 254.8, E = 7.1e-72
                   *->pkkepkpkkkLKqLhWdklnslrssrqAps.NPseisegtvWettvn
                         + + kkk  +L+W  ++++      ps+N +  +++ +W     
   mKIAA1695   755    GQPAFTKKKKTIRLFWNEVRPF----EWPSkN-NRRCREFLW----- 791  

                   dkldeekfLynnldldeleelFaakektkkakkrsvsekksklkkkkvqq
                    kl+       ++d+++le+lF++k+k+ + +k      k+  + + ++q
   mKIAA1695   792 SKLEPI-----KVDTSRLEHLFESKSKELSVTK------KT--AADGKRQ 828  

                   nlkilDpkrsqnpplaIllrslhcklsfeetvikeailevDedvlsvdll
                   ++ +lD+krs++  ++I l++l   ++     ik ail++De +l+++ +
   mKIAA1695   829 EIIVLDSKRSNA--INIGLTVL---PPPRT--IKIAILNFDEYALNKEGI 871  

                   eqLlkfaPYsktkeelkklreykeddekspeeLaraeqiFlllisnLipy
                   e+ l++ P   t+ee +k++e++ ++  +  +L+ aeq Fll++s+ i+ 
   mKIAA1695   872 EKILTMIP---TEEEKQKIQEAQLAN--PEVPLGSAEQ-FLLTLSS-ISE 914  

                   leeRlnallfkanFeeevedLkpklekveaAceeLreSkkFrklLeliLa
                   l++Rl++++fk+ +e +  +  + l  ++++  +L ++k +  +L  +La
   mKIAA1695   915 LSARLHLWAFKMDYETTEKEVAEPLLDLKEGIDQLENNKTLGFILSTLLA 964  

                   iGNyMNagsrrrrGqAqGFkLssLlkLsdvKsadnktTLLHflvkiirkk
                   iGN++N      + +A++F+Ls+L k   vK++  k++LLH+++  + ++
   mKIAA1695   965 IGNFLN------GTNAKAFELSYLEKVPEVKDTVHKQSLLHHVCTMVVEN 1008 

                   ypdllkFysdlhhvdkaskvnleqlekdvkqlerqiknlEldkggLsdpe
                   +pd  ++ys+++++++++kv+++ql++++ q+er++k+    +++  ++e
   mKIAA1695  1009 FPDSSDLYSEIGAITRSAKVDFDQLQDNLCQMERRCKASWDHLKAIAKHE 1058 

                   ghpddkflevmtpFlkaAkekyekLqkdlrdlktrfeklveyygedpkd.
                     p   + ++m++Flk+++e++  L+ ++r+  +rf+++  ++g  p + 
   mKIAA1695  1059 MKP--VLKQRMSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAi 1106 

                   rdvspeeFFkdfneFlkeFkkaaeenlaiEskrkeeEeeerrakqlalrv
                   r+v ++ F+  ++eF+ e+   +e++  + +k+k+++  er +k +    
   mKIAA1695  1107 REVNINKFCRIISEFALEYRTTRERV--LQQKQKRANHRER-NKTRG--- 1150 

                   kette..yeqssskqkeneerrvernplmdfev...erdflgvlds....
                   k++t+++++++ss+++  +      + l   e   + ++ ++vl+ +++ 
   mKIAA1695  1151 KMITDsgKFSGSSPAAPSQ-----PQGLSYAEDaaeHENMKAVLKTsspa 1195 

                   llkelrtdssfer<-*
                   l ++      ++r   
   mKIAA1695  1196 LEDATPVLGVRTR    1208 

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