hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp08127/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1695  ( 1294 res)   mbp08127

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FH2      Formin Homology 2 Domain                       452.2   4.4e-132   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FH2        1/1     756  1126 ..     1   413 []   452.2 4.4e-132

Alignments of top-scoring domains:
FH2: domain 1 of 1, from 756 to 1126: score 452.2, E = 4.4e-132
                   *->kkepkpkkkLKpLhWdKlnpsqdrgt.......svWdkldeesfekk
                       ++ ++kkk+ +L+W  ++p +++++++++ ++++W kl+       
   mKIAA1695   756    QPAFTKKKKTIRLFWNEVRPFEWPSKnnrrcreFLWSKLEPI----- 797  

                   ldldlselEelFsakakkkkekksseksskskkkkkeisvLDpkrsQNia
                    ++d+s+lE+lF++k+k+ +  k    ++++  k++ei vLD+krs++i+
   mKIAA1695   798 -KVDTSRLEHLFESKSKELSVTK----KTAADGKRQEIIVLDSKRSNAIN 842  

                   IlLrklsklppeeivqAilemDedvLgvvlflkemldllenLlkmaPtke
                   I L+ l  +pp+ i+ Ail++De +L+        ++++e+ l+m+Pt+e
   mKIAA1695   843 IGLTVL--PPPRTIKIAILNFDEYALN--------KEGIEKILTMIPTEE 882  

                   ElkklqekeykgdekspskLgraEqqFLlelskliprleeRlrallFkst
                   E +k+qe+++ ++   + +Lg+aE qFLl+ls+ i++l++Rl++++Fk++
   mKIAA1695   883 EKQKIQEAQLANP---EVPLGSAE-QFLLTLSS-ISELSARLHLWAFKMD 927  

                   FeeeveelkpsletleaAseeLreSrkfkklLeliLalGNyMNsGtrrrG
                   +e++++e++++l +l++++++L +++++  +L ++La+GN++N+      
   mKIAA1695   928 YETTEKEVAEPLLDLKEGIDQLENNKTLGFILSTLLAIGNFLNG-----T 972  

                   nAkGFkLssLlKLsdvKstidnktTLLHflvkeieesEGkrlEeyrKLkl
                   nAk+F+Ls+L K+++vK+t ++k++LLH+++++++e            ++
   mKIAA1695   973 NAKAFELSYLEKVPEVKDT-VHKQSLLHHVCTMVVE------------NF 1009 

                   pelldfsseLshVekAakvdleeLeadvkeLekglkklekelelseeSkv
                   p+ +d++se+++++++akvd+++L++++ ++e+++k+ ++ l+++++   
   mKIAA1695  1010 PDSSDLYSEIGAITRSAKVDFDQLQDNLCQMERRCKASWDHLKAIAK--- 1056 

                   sdeepsdkFvevmkeFleeAeekldkLesllkeakelfkelteYFghgge
                     +e  + ++++m+eFl++++e++  L++ ++++ ++f+++++++gh+++
   mKIAA1695  1057 --HEMKPVLKQRMSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPY 1104 

                   dpkdetspeeFFkilrdFlnefk<-*
                   +++ e++++ F+ i+++F++e++   
   mKIAA1695  1105 AIR-EVNINKFCRIISEFALEYR    1126 

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