hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp00184/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA1672  ( 828 res)   mbp00184

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
EFh      EF-hand, calcium binding motif                  75.9    5.1e-18   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
EFh        1/6      79   107 ..     1    29 []    11.2      6.6
EFh        2/6     221   249 ..     1    29 []    19.0     0.68
EFh        3/6     402   430 ..     1    29 []     9.4       11
EFh        4/6     509   537 ..     1    29 []     5.2       36
EFh        5/6     654   682 ..     1    29 []    18.5      0.8
EFh        6/6     765   793 ..     1    29 []    12.5      4.5

Alignments of top-scoring domains:
EFh: domain 1 of 6, from 79 to 107: score 11.2, E = 6.6
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      ++  aF  +D D+dG I+ ++f +ll+ l   
   mKIAA1672    79    DVYSAFFRIDLDRDGIISMHDFHRLLQYL    107  

EFh: domain 2 of 6, from 221 to 249: score 19.0, E = 0.68
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      e++++++ +D+ g G+I+++Ef++ l      
   mKIAA1672   221    EFEKLWQNYDTEGRGYITYQEFLHRLGIR    249  

EFh: domain 3 of 6, from 402 to 430: score 9.4, E = 11
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       l eaF+ +Dk   G++   Ef ++l+s+   
   mKIAA1672   402    ALVEAFSALDKVDTGFVKAMEFGDVLRSV    430  

EFh: domain 4 of 6, from 509 to 537: score 5.2, E = 36
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       + + F+ fD+ ++ +++ +Ef+ ++++    
   mKIAA1672   509    TIVQEFENFDTLKSNTVSRDEFRSICTRH    537  

EFh: domain 5 of 6, from 654 to 682: score 18.5, E = 0.8
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      el +  +e D+D+ G+I+  Ef+al+ ++   
   mKIAA1672   654    ELLRECKEKDTDKQGTISAAEFLALVEKF    682  

EFh: domain 6 of 6, from 765 to 793: score 12.5, E = 4.5
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       +++ F+ +Dk+g G ++  +f+++l+     
   mKIAA1672   765    PMRRSFKTYDKNGTGLLSVADFRKVLRQY    793  

//