hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfk/mfk00026/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1662  ( 616 res)   mfk00026

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     73.1    3.6e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      39   140 ..     1    82 []    73.1  3.6e-17

Alignments of top-scoring domains:
PH: domain 1 of 1, from 39 to 140: score 73.1, E = 3.6e-17
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk......kpkgsip
                        k+Gw++++   + wkk++fvL++++L yy++++ ++ +++ g+i+
   mKIAA1662    39    NFKKGWMSILDePgEWKKHWFVLTDSSLKYYRDStaeeadELDGEID 85   

                   Lsgc.svre.p.....cFeivt.dr....tlllqAeseeereeWvealqs
                   L++c+ v+e +  ++ +F+i+ + r+++ +++l+A ++  r+ W+eal++
   mKIAA1662    86 LRSCtDVTEyAvqrnyGFQIHVrLRtkdaVYTLSAMTSGIRRNWIEALRK 135  

                   aiaka<-*
                    +++    
   mKIAA1662   136 TVRPT    140  

//