hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfk/mfk00026/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1662  ( 616 res)   mfk00026

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       PH domain                                       71.1    2.3e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      39   138 ..     1    92 []    71.1  2.3e-17

Alignments of top-scoring domains:
PH: domain 1 of 1, from 39 to 138: score 71.1, E = 2.3e-17
                   *->vikeGwLlkkggkkswkkRyfvLfndvLlyykdkk....kkpkgsip
                        k+Gw++  +  ++wkk++fvL++++L yy+d++ ++ +++ g i+
   mKIAA1662    39    NFKKGWMSILDEPGEWKKHWFVLTDSSLKYYRDSTaeeaDELDGEID 85   

                   Lsgi.qvekvpdnkrkncFeirt.dr...etlllqaeseeerkeWvkaiq
                   L++++ v+++  + r+++F+i+ + r+++ +++l+a ++  r+ W++a++
   mKIAA1662    86 LRSCtDVTEYAVQ-RNYGFQIHVrLRtkdAVYTLSAMTSGIRRNWIEALR 134  

                   sair<-*
                   + +r   
   mKIAA1662   135 KTVR    138  

//