hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg22211/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1630  ( 293 res)   mbg22211

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
E1_dh    Dehydrogenase E1 component                     -68.4    4.5e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
E1_dh      1/1       1   177 [.     1   327 []   -68.4  4.5e-05

Alignments of top-scoring domains:
E1_dh: domain 1 of 1, from 1 to 177: score -68.4, E = 4.5e-05
                   *->yrmmllrRmedarmalykrkgirGFyhlyaGqEAlqvGiaaAldkgv
                                                                     
   mKIAA1630     -    ----------------------------------------------- -    

                   DyviptmPYRdhgvllarGvskleevlaelyGreaGcskGkGGSmhmpgy
                        t                           +                
   mKIAA1630     1 -----T---------------------------F---------------- 2    

                   ygpknnrfyggngivgaqaqvpipaAvGiAlAakekreQfyvgdyrgkke
                                    q      +                         
   mKIAA1630     3 -----------------Q------V------------------------- 4    

                   vaitlfGDGAFtnqGqffEalNfAalwklPvgGaIFvceNNqyAisTpae
                        +GD++F +qG++ E+++++ l+   +gG I+ ++NNq + +Tpae
   mKIAA1630     5 -----HGDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAE 49   

                   rssasteyadrArGygIPgirVDGmDplAVyqAvKeAaerAreGkGPtLI
                   r+++s + +d ++ +g ++i+V+G+ p++V  A++ A e+ r++ +++++
   mKIAA1630    50 RGRSSLYSSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIV 99   

                   ElvTYRygGHsmsDdpstYRtreeveevrkkkDPikrlkkhLvskGlvse
                   +l++YR+ GH++ D+p ++  + +++ +r+ k    ++++hL+ +Gl ++
   mKIAA1630   100 DLLCYRQWGHNELDEPFFTN-PVMYKIIRARKSIPDTYAEHLIASGLMTQ 148  

                   eElkeiekevrkeieeAvkkAesapepnpe<-*
                   eE+ +i  ++  + ++  +  ++ + p+++   
   mKIAA1630   149 EEVSDIKTSYYTKLNDHLA-NVAHYSPPAT    177  

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