hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04778/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1625  ( 222 res)   mbh04778

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus   179.4    3.6e-49   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECTc      1/1       1   222 []     1   407 []   179.4  3.6e-49

Alignments of top-scoring domains:
HECTc: domain 1 of 1, from 1 to 222: score 179.4, E = 3.6e-49
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                                                                     
   mKIAA1625     -    ----------------------------------------------- -    

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                      p           d                      + + n++hl+  
   mKIAA1625     1 ---P-----------D----------------------SSI-NPDHLS-- 11   

                   yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhDleslDP
                   yF+f+Gr++G+A++++ ++   F+ pFyK+LLgkp    + l+Dles+DP
   mKIAA1625    12 YFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKP----IQLSDLESVDP 57   

                   elyksLvwLilvrrKleleeDlseeskslenditeveldmaLtFsivles
                   el+ksLvw+                   lendit v ld   tF  v+++
   mKIAA1625    58 ELHKSLVWI-------------------LENDITPV-LD--HTF-CVEHN 84   

                   dfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreG
                    fg   ++ELkp+G+n+pVTeeNkkEYV+l++++r+ +g+e q+ A+ +G
   mKIAA1625    85 AFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKG 134  

                   FseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrggYtensq
                   F+e+ip++lL+  Fd++ELeL+i+Gl   id++d+ksnT+ + +  ++s 
   mKIAA1625   135 FNELIPQHLLK-PFDQKELELIIGGLD-KIDLNDWKSNTRLK-HCVADSN 181  

                   tirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpq
                   ++   +wFW++ve F+ e r++LLqFVTGs r+P  ++GF+aL++     
   mKIAA1625   182 IV---RWFWQAVETFDEERRARLLQFVTGSTRVP--LQGFKALQG----- 221  

                   kFtIrkagsetlsdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAIneg
                          +                                          
   mKIAA1625   222 -------D------------------------------------------ 222  

                   RiggeGFgls<-*
                                
   mKIAA1625     - ----------    -    

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