hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04778/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1625  ( 222 res)   mbh04778

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECT     HECT-domain (ubiquitin-transferase)            301.6    9.7e-87   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECT       1/1       1   220 [.     1   366 []   301.6  9.7e-87

Alignments of top-scoring domains:
HECT: domain 1 of 1, from 1 to 220: score 301.6, E = 9.7e-87
                   *->tLlsrelfnPdygLFeysdnseakseeddsysgyvedsytlfpnPls
                                                                  P+s
   mKIAA1625     1    --------------------------------------------PDS 3    

                   gesnpehervlkyFkflGrilGlAlydgrllDlpFsraFyKklLmagkps
                   ++ np+h   l+yF+f+Gri+GlA+++g++++  F+ +FyK+lL  gkp 
   mKIAA1625     4 SI-NPDH---LSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLL--GKP- 46   

                   igivtleDlesvDPelynSLkwllendgdKkIedsLLgsledveedLeLt
                      + l+DlesvDPel++SL+w+lend++                +L+ t
   mKIAA1625    47 ---IQLSDLESVDPELHKSLVWILENDIT---------------PVLDHT 78   

                   FsveeessvgfeadarffGgtktveELkPnGrnipVTneNkeeYvelyvd
                   F+ve++    f       G + ++e LkPnGrn+pVT+eNk+eYv+lyv+
   mKIAA1625    79 FCVEHNA---F-------GRILQHE-LKPNGRNVPVTEENKKEYVRLYVN 117  

                   yrLnkgiekQfeAFrkGFsevipsrlLslFdpeELelLicGspeeiDvdd
                   +r+ +gie Qf A++kGF+e+ip +lL+ Fd +ELel+i+G++ +iD++d
   mKIAA1625   118 WRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLD-KIDLND 166  

                   LkenTeYdggYtedsplktiqwFWevleeftneeraklLqFvTGssRlPv
                   +k+nT+ + ++ +ds   +++wFW+++e f++e ra+lLqFvTGs R+P+
   mKIAA1625   167 WKSNTRLK-HCVADSN--IVRWFWQAVETFDEERRARLLQFVTGSTRVPL 213  

                   gGFkaLqgGsnGpPkFtIvrkegggdddrLPtAhTCFNrLkLPpYsSkei
                   +GFkaLq                                           
   mKIAA1625   214 QGFKALQ------------------------------------------- 220  

                   LrekLllAInEgseGFgle<-*
                                         
   mKIAA1625     - -------------------    -    

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