hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm05262/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1624  ( 530 res)   mpm05262

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
Lung_7-TM_R Lung seven transmembrane receptor           457.4   1.2e-133   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
Lung_7-TM_R   1/1     192   483 ..     1   310 []   457.4 1.2e-133

Alignments of top-scoring domains:
Lung_7-TM_R: domain 1 of 1, from 192 to 483: score 457.4, E = 1.2e-133
                   *->ikktGlYclyfhicdpslskEdPsgsksstklkvtvnwkNpyGYLsA
                       +++GlY+lyfh+c+ +++k  P++++s++ l++ +++kNp+ YLsA
   mKIAA1624   192    DDQEGLYSLYFHKCSGNNVK--PGEQASFS-LNIAITEKNPNSYLSA 235  

                   sdaPLmpfYgiMslaYvllgilWffilakywrDiLplQkwIaaviaLgmv
                   +++PL+++Y++M+l+++l g +W++il+k+++D++++++++aa+ +++++
   mKIAA1624   236 GEIPLPKLYVSMALFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSL 285  

                   ElaffyieYatiNskGsstgpegltvfasilsalKktlsriLlLivSlGY
                   +l+f++i+Y++i s+G++  +eg++v+++i+++lK++l++i+++++++G+
   mKIAA1624   286 SLVFHAIDYHYISSQGFP--IEGWAVVYYITHLLKGALLFITIALIGTGW 333  

                   GiVkPrLGdtlkkvagigvlyfvaaevlglvresgiisdssgklwlvlff
                   +++k++L+d++kk+++i+++++v+a+v+++++es+++++++++lw+  +f
   mKIAA1624   334 AFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLF 383  

                   llpllcalldaffilWIFrSLskATlrdLklrRnlvKLslYRhFtntlii
                   l++llc+++++f+++W++r+L++A+ +d+k+++nl+KL+l+Rh+++++++
   mKIAA1624   384 LVDLLCCGAILFPVVWSIRHLQEASATDGKAAINLAKLRLFRHYYVLIVC 433  

                   sVvasfifilvekiyfvgmktidscnkdWkelWvitYafWpellffvlLv
                   ++++++i+++++k+         +++++Wk  W+++  +++e++++v++v
   mKIAA1624   434 YIYFTRIIAFLLKF---------AVPFQWK--WLYQ--LLDETATLVFFV 470  

                   vIcyLWRPSqNNq<-*
                   +++y++RP+++N+   
   mKIAA1624   471 LTGYKFRPASDNP    483  

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