hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm03004/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1623  ( 1116 res)   mpm03004

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF590   Protein of unknown function, DUF590            211.1    1.7e-59   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF590     1/1     530   934 ..     1   287 []   211.1  1.7e-59

Alignments of top-scoring domains:
DUF590: domain 1 of 1, from 530 to 934: score 211.1, E = 1.7e-59
                   *->aiiligkQviwnnimEigiPylvklfrklklrl..............
                      a++li++Q++ +n +E++ P l ++     l l++  +  +   +  
   mKIAA1623   530    ATLLITRQLL-QNVREVLQPHLYRRLGSGELGLrtilelarallgll 575  

                   ..................................................
                   ++ +++++++ + + ++++ ++++  +++ + ++++++++++   ++++ 
   mKIAA1623   576 nplrpdprrhleaqadeggagsrrclgggcgapeeeneeeeeaaverrpa 625  

                   ..................................................
                   +++++ +++++++++++++++++++++++ ++++++  + + + ++ +  
   mKIAA1623   626 geggevpegprggkeedeeedddededeeyegeegslldcglrlkkvsfa 675  

                   ..................................................
                   +++ +++++++++++  ++++++  +++ +++  +  +++++++++++++
   mKIAA1623   676 ergagrrrpgpspdglleegsptmvekglepgvftlaeeddepegppgsp 725  

                   ......................................aelkrkpkaedh
                   ++++++   ++ +++++++++++++++++++++  +++ ++ r +  +++
   mKIAA1623   726 gpepqtvllrrargegrdqgpdgdrdtetgsgdaagrqKRHNRSSWIDPP 775  

                   ksespiekAsldssryeqweydyslqpdeylglfDlfdDYLEmvLQFGfv
                   +         ++s+   q e+++ +   +y++   +f DY Em++QFG+v
   mKIAA1623   776 E--------EEHSPQLTQAELESCMK--KYED---TFQDYQEMFVQFGYV 812  

                   tLFsaaFPLAPlfALLNNviEiRlDAyKlvtvlrREYFPvprrqvadIGi
                   +LFs+aFPLA+l+AL+NN+iEiR+DA+Kl+t l+R   P++rr v++IG 
   mKIAA1623   813 VLFSSAFPLAALCALVNNLIEIRSDAFKLCTGLQR---PFGRR-VESIGQ 858  

                   WlnILeglsvlaVitNafliaftsdCfIPRlVYeysystgTLkgyvnhtL
                   W+ ++e ++vla+++N+ li+   +                         
   mKIAA1623   859 WQKVMEAMGVLAIVVNCYLIGQCGQ------------------------- 883  

                   SfFnvsdlkeGapaaasvfladstyCryadyrlpPsdpePYelskqYWhi
                          l+                      rl P+            ++
   mKIAA1623   884 -------LQ----------------------RLFPW------------LS 892  

                   laarlafvVvfEHlvllLkfllswvIPdvPrevrdqirReky<-*
                     a+++ vVv+EHl ll+k+l++ +IPd+P +v+ ++++ +y   
   mKIAA1623   893 PEAAIVSVVVLEHLALLVKYLIHVAIPDIPGWVAEEMAKLEY    934  

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