hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mid/mid33080/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1622  ( 790 res)   mid33080

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     83.1    5.7e-21   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/6      87   124 ..     1    36 []     4.6       56
HEAT       2/6     127   163 ..     1    36 []    24.5   0.0025
HEAT       3/6     166   202 ..     1    36 []    28.3  0.00018
HEAT       4/6     312   347 ..     1    36 []    17.9     0.24
HEAT       5/6     349   384 ..     1    36 []     9.7       11
HEAT       6/6     441   477 ..     1    36 []     3.4       82

Alignments of top-scoring domains:
HEAT: domain 1 of 6, from 87 to 124: score 4.6, E = 56
                   *->e.lldellplll.kllnDpdpeVReaAaeaLgalaevl<-*
                      e+l++e+l++l++k+  ++    R+ +++ Lg++ +++   
   mKIAA1622    87    EtLRHEILNPLVsKAQLSQTVQSRLVSCKILGKITNKF    124  

HEAT: domain 2 of 6, from 127 to 163: score 24.5, E = 0.0025
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++ e+lpl+ +l++D ++eVR   ++ L ++a+ +   
   mKIAA1622   127    HsIKREILPLVKSLCQDVEYEVRSCMCRQLENIAQGI    163  

HEAT: domain 3 of 6, from 166 to 202: score 28.3, E = 0.00018
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e +++ +lp l++l +D++ +VR+aA+e+L+++++ +   
   mKIAA1622   166    ElTKNVVLPELIELSRDESGSVRLAAFETLVNMLDMF    202  

HEAT: domain 4 of 6, from 312 to 347: score 17.9, E = 0.24
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + ++ el  +++ l++Dp+  VR + a ++ ++++ l   
   mKIAA1622   312    NfHM-ELYSTFFCLCHDPEVPVRHTIAICFYEVSKLL    347  

HEAT: domain 5 of 6, from 349 to 384: score 9.7, E = 11
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++++  +   l++ll+D++ eV +a ++ L +++e +   
   mKIAA1622   349    SgVH-LIHKELITLLQDESLEVLDALINHLPEILELM    384  

HEAT: domain 6 of 6, from 441 to 477: score 3.4, E = 82
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + +   l  ++  +++ ++  V++aAa++L+ ++++    
   mKIAA1622   441    QiYYRFLQRMFTIMMTNNVLPVQRAAARTLCIFLRYN    477  

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